🚴 Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
-
Updated
Dec 13, 2024 - R
#
genomic-prediction
Here are 23 public repositories matching this topic...
Can deep learning improve genomic prediction of complex human traits? by Pau Bellot, Gustavo de los Campos, Miguel Pérez-Enciso, Genetics
-
Updated
Aug 2, 2024 - Python
Code for "Using machine learning to combine genetic and environmental data for maize grain yield predictions across multi-environment trials" (Fernandes et. al 2024)
-
Updated
Jul 23, 2024 - Python
2024 BreedWheat Genomic Selection pipeline
r genetics cross-validation statistical-models genomic-selection quantitative-analysis cran-r genomic-prediction genomics-data breeding-data
-
Updated
Jan 3, 2024 - R
Trait BLUP, a Feature Selection Package for Genomic Prediction
-
Updated
Nov 14, 2018 - Python
Training set determination for genomic selection.
-
Updated
Oct 5, 2023 - R
Genomic prediction of amino acid traits in Arabidopsis seeds
-
Updated
Apr 4, 2023 - HTML
Quantitative and population genetics analyses of populations, pools, half-sib/full-sib families, and polyploids
bioinformatics gwas evolution population-genetics families genomic-selection polyploid quantitative-genetics allele-frequencies heterozygosity genomic-prediction pool-sequencing site-frequency-spectrum pool-seq-data
-
Updated
Aug 20, 2024 - Rust
Role of genomics on regulating rice grain metabolic variability under warmer nights: A statistical and image-based deep learning approach
deep-learning neural-network bayesian-methods metabolomics cnn-keras genomic-prediction metabolomics-pipeline factorial-analysis heritability-estimation multi-omic gblup
-
Updated
Dec 6, 2024 - R
Solves kernel ridge regression within the the mixed model framework. All the estimated components and parameters, e.g. BLUP of dual variables and BLUP of random predictor effects for the linear kernel (also known as RR-BLUP), are available.
-
Updated
Nov 27, 2024 - R
This project documents informatics and genomic prediction to support the National Root Crop Research Institute 2021 cassava genomic selection breeding program.
-
Updated
May 5, 2021 - R
List of papers related to Agricultural Statistics, Plant Breeding, and Quantitative Genetics
-
Updated
Oct 23, 2024
An R package for sample size determination for genomic selection
-
Updated
May 17, 2022 - HTML
BAMdelbee is a novel tool for discovering homozygous deletions in Whole-exome-sequencing (WES) and whole-genome-sequencing (WGS) data. WES or WGS samples generated by the same method produce BAM files with similar alignment coverage across the genome. BAMdelbee locates homozygous deletions by pinpointing regions covered in all samples but the on…
bioinformatics bioinformatics-analysis genomic-data-analysis mutation-analysis bioinformatics-tool genomic-prediction
-
Updated
May 14, 2022 - Python
Gradient Boosting Regression (GBR, https://github.com/scikit-learn/scikit-learn) model for genomic predictions
-
Updated
Mar 1, 2024 - Python
Evaluating metabolic and genomic data for predicting grain traits under high night temperature stress in rice
machine-learning random-forest svm cross-validation data-visualization bayesian-methods xgboost classification multi-omics multi-trait-analysis genomic-prediction gblup high-night-temperature
-
Updated
Apr 2, 2023 - R
Some deep learning genomics projects
-
Updated
Jun 22, 2018 - Python
TARI 2020 GS: (1) Conversion of DArTseqLD data and imputation of DArT report DCas20-5629 (with GS C1). (2) Cross-validation and genomic prediction
-
Updated
Jan 21, 2021 - R
Improve this page
Add a description, image, and links to the genomic-prediction topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the genomic-prediction topic, visit your repo's landing page and select "manage topics."