A package for fast bayesian analysis of spatial occupancy models. OccuSpytial implements several samplers for the single season site spatial occupancy model using the Intrinsic Conditional Autoregressive (ICAR) model for spatial random effects.
For usage examples refer to the project's documentation.
The package can be installed using pip.
pip install occuspytial
Alternatively, it can be installed from source using poetry
git clone https://github.com/zoj613/OccuSpytial.git
cd OccuSpytial/
poetry install
Note that installing this way requires that Cython is installed for a successful build.
To run tests after installation, the package pytest is required. Simply run
the following line from the terminal in this package's root directory.
python -m pytestIf all tests pass, then you're good to go.
OccuSpytial is free software made available under the BSD License. For details see the LICENSE file.