This repo contains code for processing and visualization of current clamp electrophysiology data in Python
- Extract electrophysiology measurements from current clamp data (pClamp) using stfio and AllenSDK
- Animated plots of membrane voltage in response to current injection (current_clamp.py)
- Automatic analysis pipeline using Datajoint.io to combine analysis results with multiple levels of metadata (animals, cells, analysis parameters, etc) (schema_ephys.py)
- Interactive data visualization using Dash and Plot.ly (iclamp_app.py)