Rapid identification of Staphylococcus aureus agr locus type and agr operon variants.
QUT Capstone Project featuring a vanilla javascript project designed to display genome information from a PostgreSQL database in a user friendly way. Allows genomes to be tagged in groups and generates simple aggregate statistics.
SCAPE - StaphyloCoccus Aureus Pangenome Exploration
This repository introduces the codes applied to the nasal microbial community of the latest available curated GEMs of D. pigrum and S. aureus.
Raw data and code for the Genomic Analysis of Singles and Pools (GASP) project - https://doi.org/10.1099/mgen.0.001111
Curve Growth modeling-IPASS project
A bioinformatics pipeline for RNA-Seq analysis of Staphylococcus aureus persisters under antibiotic stress, based on Peyrusson et al. (2020). Built with Nextflow and Docker for reproducibility.
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