Infrastructure for Ordering using Seriation - R Package
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Dec 6, 2024 - R
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seriation
Here are 8 public repositories matching this topic...
Consensus Seriation for Binary Data
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Nov 19, 2024 - R
An efficient implementation of the Seriation problem which 'finds a suitable linear order for a set of objects'. It has been used to order a network of proteins such that 'related' nodes are closer in the other.
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Jan 25, 2021 - C
Python implementation of the research paper with the same title published in the PLOS Computational Biology journal. Link to the paper: https://doi.org/10.1371/journal.pcbi.0020006
data-science scientific-computing probabilistic-programming mcmc seriation paleontology paleontological-analisys implementation-of-research-paper
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Jun 3, 2020 - C
Algorithm to reorder binary and categorical matrices using convolution
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Mar 19, 2021 - Scala
OrderedHeatMapAnalysis (OHMA) is a direct data analysis framework allowing to simultaneously visualize and analyze the structure of complex datasets. An optimized seriation of rows and columns of the input data table is performed, resulting in a mapping of the whole dataset into an ordered heatmap.
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Feb 1, 2024 - R
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