A simple tool to create DNA motif plots based directly on matplotlib to enable construction of complex plots
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Apr 11, 2019 - Jupyter Notebook
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dna-motif
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This is a scanner designed to recognise DNA motifs within a long stretch of DNA. It uses two models for discrimination, one model representing the target and the second model representing the background.
javascript training js scanner motif dna background dna-motif discrimination discriminant-analysis motif-finding position-weight-matrix
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Mar 21, 2022 - HTML
Identification of a functional downstream core promoter element in human promoters using an Expectation-Maximization algorithm
publication-data publication expectation-maximization-algorithm dna-motif motif-discovery publication-code
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Sep 8, 2021 - R
EMnEM is a DNA motif finder that takes multiple alignments and a phylogenetic tree and identifies conserved patterns
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Dec 20, 2017
MEME 5.3.2 with MPI support in a Singularity Container
bioinformatics machine-learning-algorithms singularity-container dna-motif em-algorithm dna-sequences meme-suite
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Feb 10, 2021
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