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Release 2.2
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@popaula937 popaula937 released this 23 Mar 09:57
· 2138 commits to master since this release
2.2
9a1884d

Released packages:

  • On Pypi
    • tvb-library
    • tvb-framework
    • tvb-rest-client
    • tvb-contrib

tvb-library

  • review API to merge serial and parallel co-simulations

tvb-framework

  • tvb data stoage encription and decryption when a project is used

tvb-rest-client

  • Code refactor

tvb-contrib

  • review API to merge serial and parallel simulations

Involved Jira tasks in 2.2

Bug

* [TVB-2714] - Running all FRW unit-tests on Windows fails worse than on Unix
* [TVB-2858] - Importing TS with links in empty project fails
* [TVB-2859] - Fix surface visualizer with region boundaries
* [TVB-2862] - Clean files sent via REST uploaders after the operation is complete
* [TVB-2864] - Analyze simulator errors
* [TVB-2869] - Review the usage of boolean values as filter parameters
* [TVB-2876] - Fix integrator choice in PhasePlane
* [TVB-2881] - Removing a PSE burst throws exception
* [TVB-2886] - Fix surface visualizer for large surfaces
* [TVB-2887] - Fix TimeSeriesVolumeVisualiser 
* [TVB-2910] - Fix Brain Viewer for TimeSeriesSurface
* [TVB-2914] - Jupyther Notebook not starting from TVB_Distribution

Story

* [TVB-2733] - Review Simulator Page Flow
* [HBP-90] - TVB with HCP backend and Security

Task

* [TVB-2664] - Review and clean the fire operation flow
* [TVB-2704] - Review Jenkins builds on versions 2.*
* [TVB-2849] - Export/Import of DatatypeGroup with related entities
* [TVB-2855] - Migrate Tracts importers to neoforms and fix the Tracts Visualizer
* [TVB-2857] - Project planning and discussions VBC
* [TVB-2861] - Operation overlay does not display inputs for all operations
* [TVB-2865] - Prepare for meetings
* [TVB-2871] - Review usages of load_h5_of_gid method in viewers
* [TVB-2875] - Define a Jenkins job to test migration from 1.5.8
* [TVB-2901] - Testing before end of sprint
* [TVB-2904] - Prepare release 2.2
* [TVB-2906] - Prepare video of TVB on JupyterHub VRE

Improvement

* [TVB-2880] - Export only view model H5 in simulation ZIP

Citation

When using TVB 2.2 or higher, for scientific publications, please cite it as follows:

Paula Sanz Leon, Stuart A. Knock, M. Marmaduke Woodman, Lia Domide, Jochen Mersmann, Anthony R. McIntosh, Viktor Jirsa (2013)
The Virtual Brain: a simulator of primate brain network dynamics. Frontiers in Neuroinformatics (7:10. doi: 10.3389/fninf.2013.00010)

Schirner M, Domide L, Perdikis D, Triebkorn P, Stefanovski L, Pai R, Prodan P, Valean B, Palmer J, Langford C, Blickensdörfer A,
van der Vlag M, Diaz-Pier S, Peyser A, Woodman M, Zehl L, Fousek J, Petkoski S, Kusch L, Hashemi M, Marinazzo D, Mangin JF, Flöel A,
Akintoye S, Stahl C, Deco G, McIntosh, Hilgetag C, Morgan M, Schuller B, Upton A, McMurtrie C, Dickscheid T, Bjaalie J, Amunts K,
Mersmann J, Jirsa V, Ritter P. https://arxiv.org/abs/2102.05888
Brain simulation as a Service: The Virtual Brain on the European Research Platform EBRAINS.

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