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Release - miscellaneous #3984

Merged
merged 67 commits into from
Dec 13, 2023
Merged

Release - miscellaneous #3984

merged 67 commits into from
Dec 13, 2023

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KatyTaylor
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Closes #

Changes proposed in this pull request

  • Dependency updates
  • Removal of Rails 'next'
  • RVI work in progress (feature flagged)
  • Fix tag group generation script
  • Improve UAT Actions UI
  • DPL-960 allow fails + additional state on input plate
  • Documentation
  • Tweaks for scRNA Core pipeline
  • Enable scRNA Core pipeline by inserting submission template ('unflag' feature)

Instructions for Reviewers

[All PRs] - Confirm PR template filled
[Feature Branches] - Review code
[Production Merges to main]
    - Check story numbers included
    - Check for debug code
    - Check version

depfu bot and others added 30 commits October 12, 2023 09:10
… plates to transition through the required lab steps
DPL-937 - Bait capture library prep pipeline
dependabot bot and others added 28 commits November 29, 2023 21:45
Bumps [carrierwave](https://github.com/carrierwaveuploader/carrierwave) from 3.0.4 to 3.0.5.
- [Release notes](https://github.com/carrierwaveuploader/carrierwave/releases)
- [Changelog](https://github.com/carrierwaveuploader/carrierwave/blob/master/CHANGELOG.md)
- [Commits](carrierwaveuploader/carrierwave@v3.0.4...v3.0.5)

---
updated-dependencies:
- dependency-name: carrierwave
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
….0.5

Bump carrierwave from 3.0.4 to 3.0.5
Update all Bundler dependencies (2023-10-12)
- needed for Limber scRNA Core Cell Extraction pipeline
Fix for DPL-812 - scRNA Core Cell Extraction report - missing donor id
Bumps [vite](https://github.com/vitejs/vite/tree/HEAD/packages/vite) from 4.4.8 to 4.4.12.
- [Release notes](https://github.com/vitejs/vite/releases)
- [Changelog](https://github.com/vitejs/vite/blob/v4.4.12/packages/vite/CHANGELOG.md)
- [Commits](https://github.com/vitejs/vite/commits/v4.4.12/packages/vite)

---
updated-dependencies:
- dependency-name: vite
  dependency-type: direct:development
...

Signed-off-by: dependabot[bot] <support@github.com>
DPL-960- Bioscan input plate state changes
Revert "DPL-960- Bioscan input plate state changes"
…Extraction-pipeline

DPL-1022 (SS) Enable scRNA Core Cell Extraction pipeline - insert submission template
Change RVI BCL files to WIP ready for prod deployment
@KatyTaylor KatyTaylor marked this pull request as ready for review December 13, 2023 10:57
@KatyTaylor KatyTaylor merged commit dd344e7 into master Dec 13, 2023
24 checks passed
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8 participants