Fix Prokka container and update MetaBat2 module

sanger-tol · Dec 20, 2024 · 3970d41 · 3970d41
1 parent f6db65a
commit 3970d41
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Showing 7 changed files with 83 additions and 54 deletions.
diff --git a/modules.json b/modules.json
@@ -61,9 +61,8 @@
                     },
                     "metabat2/metabat2": {
                         "branch": "master",
-                        "git_sha": "6d736588f4af4bc9b615bd7189442bd4272ae26e",
-                        "installed_by": ["modules"],
-                        "patch": "modules/nf-core/metabat2/metabat2/metabat2-metabat2.diff"
+                        "git_sha": "cc217b9d56fe9d8aee2e152f6fc31ba8e5cba952",
+                        "installed_by": ["modules"]
                     },
                     "metamdbg/asm": {
                         "branch": "master",

diff --git a/modules/nf-core/metabat2/metabat2/environment.yml b/modules/nf-core/metabat2/metabat2/environment.yml
diff --git a/modules/nf-core/metabat2/metabat2/main.nf b/modules/nf-core/metabat2/metabat2/main.nf
diff --git a/modules/nf-core/metabat2/metabat2/metabat2-metabat2.diff b/modules/nf-core/metabat2/metabat2/metabat2-metabat2.diff
diff --git a/modules/nf-core/metabat2/metabat2/tests/main.nf.test b/modules/nf-core/metabat2/metabat2/tests/main.nf.test
diff --git a/modules/nf-core/metabat2/metabat2/tests/main.nf.test.snap b/modules/nf-core/metabat2/metabat2/tests/main.nf.test.snap
diff --git a/modules/nf-core/prokka/prokka.diff b/modules/nf-core/prokka/prokka.diff