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chore: update JOSS paper
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simpar1471 committed Dec 14, 2024
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Expand Up @@ -48,7 +48,7 @@ of Preterm Infants Standards [@Villar2015PostnatalProject]; and the WHO Child Gr
[@WHOMulticentreGrowthReferenceStudyGroup2006WHOAge; @WHO2006WHODevelopment;
@WHO2007WHODevelopment]. Also included are functions to classify growth for
indicators including size-for-gestational age, small vulnerable newborns
[@Ashorn2023SmallImpact, @Lawn2023SmallCounting], stunting, wasting,
[@Ashorn2023SmallImpact; @Lawn2023SmallCounting], stunting, wasting,
weight-for-age (underweight), and micro/macrocephaly.

# Statement of need
Expand All @@ -72,27 +72,31 @@ standards implemented within:
@Villar2017BodyProject]
- INTERGROWTH-21^st^ Postnatal Growth of Preterm Infants Standards
[@Villar2015PostnatalProject]
- WHO Child Growth Standards[@WHOMulticentreGrowthReferenceStudyGroup2006WHOAge;
@WHO2006WHODevelopment; @WHO2007WHODevelopment]
- WHO Child Growth Standards
[@WHOMulticentreGrowthReferenceStudyGroup2006WHOAge; @WHO2006WHODevelopment;
@WHO2007WHODevelopment]

This is more growth standards than made available in other R packages designed
to perform the same sorts of analyses. The following table displays
functionality of other R packages designed to implement the above growth
standards:
standards. A tick (✓) indicates that all possible standards are
included in a package, a cross (✘) indicates that these standards are
completely missing, and a warning sign (⚠) indicates that some of these
standards are implemented but not others.:

| Software | Platform | WHO (0-5 years) | IG-21^st^ NBS | IG-21^st^ PNG | IG-21^st^ Fetal | Functionality |
|----|----|----|----|----|----|----|
| [gigs](https://www.github.com/ropensci/gigs/) | R | | | | | Values ↔ z-scores/centiles |
| [anthro](https://cran.r-project.org/web/packages/anthro/index.html) | R | | | | | Values → z-scores |
| [AGD](https://cran.r-project.org/web/packages/AGD/index.html) | R | | | | | Values ↔ z-scores |
| [childsds](https://cran.r-project.org/web/packages/childsds/index.html) | R | | | | | Values → z-scores/centiles |
| [ki-tools/growthstandards](https://www.github.com/ki-tools/growthstandards/) | R | | || ⚠️ | Values ↔ z-scores/centiles |
| [nutriverse/intergrowth](https://github.com/nutriverse/intergrowth/) | R | | | || Values → z-scores/centiles |
| [sitar](https://cran.r-project.org/web/packages/sitar/index.html) | R | | | | | Values ↔ z-scores/centiles |
| [zscorer](https://cran.r-project.org/web/packages/zscorer/index.html) | R | | | | | Values → z-scores/centiles |
| [gigs](https://www.github.com/ropensci/gigs-stata/) (Stata) | Stata | | | | | Values ↔ z-scores/centiles |
| [zanthro](https://journals.sagepub.com/doi/epdf/10.1177/1536867X1301300211) (Stata) | Stata | | | | | Values → z-scores/centiles |
| [gigs](https://github.com/SASPAC/gigs/) (SAS) | SAS | | | | | Values ↔ z-scores/centiles |
| [gigs](https://www.github.com/ropensci/gigs/) | R | | | | | Values ↔ z-scores/centiles |
| [anthro](https://cran.r-project.org/web/packages/anthro/index.html) | R | | | | | Values → z-scores |
| [AGD](https://cran.r-project.org/web/packages/AGD/index.html) | R | | | | | Values ↔ z-scores |
| [childsds](https://cran.r-project.org/web/packages/childsds/index.html) | R | | | | | Values → z-scores/centiles |
| [ki-tools/growthstandards](https://www.github.com/ki-tools/growthstandards/) | R | | ||| Values ↔ z-scores/centiles |
| [nutriverse/intergrowth](https://github.com/nutriverse/intergrowth/) | R | | | || Values → z-scores/centiles |
| [sitar](https://cran.r-project.org/web/packages/sitar/index.html) | R | | | | | Values ↔ z-scores/centiles |
| [zscorer](https://cran.r-project.org/web/packages/zscorer/index.html) | R | | | | | Values → z-scores/centiles |
| [gigs](https://www.github.com/ropensci/gigs-stata/) (Stata) | Stata | | | | | Values ↔ z-scores/centiles |
| [zanthro](https://journals.sagepub.com/doi/epdf/10.1177/1536867X1301300211) (Stata) | Stata | | | | | Values → z-scores/centiles |
| [gigs](https://github.com/SASPAC/gigs/) (SAS) | SAS | | | | | Values ↔ z-scores/centiles |

The R [package website](https://docs.ropensci.org/gigs/) also includes
benchmarks of these packages relative to each other. For speed, ``gigs`` (for R)
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