012_023790_IW1 #6
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| # Extract bursts from SLCs | |
| name: InSAR_Pair | |
| run-name: ${{ inputs.burstId }} | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| reference: | |
| type: string | |
| required: true | |
| description: Reference SLC | |
| default: S1A_IW_SLC__1SDV_20230621T121402_20230621T121429_049084_05E705_BAD8 | |
| secondary: | |
| type: string | |
| required: true | |
| description: Secondary SLC | |
| default: S1A_IW_SLC__1SDV_20230703T121403_20230703T121430_049259_05EC58_F9AB | |
| burstId: | |
| type: string | |
| required: true | |
| description: Secondary SLC | |
| default: 012_023790_IW1 | |
| polarization: | |
| type: choice | |
| required: true | |
| description: Polarization | |
| default: 'VV' | |
| options: ['VV', 'VH', 'HH'] | |
| looks: | |
| type: choice | |
| required: true | |
| description: Range x Azimuth Looks | |
| default: 20x4 | |
| options: | |
| - 20x4 | |
| - 10x2 | |
| - 5x1 | |
| jobname: | |
| type: string | |
| required: true | |
| description: Shorthand jobname (e.g. 20230621_20230703) | |
| default: hyp3-isce2 | |
| # Must duplicate inputs for workflow_call (https://github.com/orgs/community/discussions/39357) | |
| workflow_call: | |
| inputs: | |
| reference: | |
| type: string | |
| required: true | |
| secondary: | |
| type: string | |
| required: true | |
| burstId: | |
| type: string | |
| required: true | |
| polarization: | |
| type: string | |
| required: true | |
| looks: | |
| type: string | |
| required: true | |
| jobname: | |
| type: string | |
| required: false | |
| jobs: | |
| hyp3-isce2: | |
| name: ${{ inputs.jobname }} | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: 'relativeorbit/hyp3-isce2' | |
| ref: 'backprocess' | |
| - name: Install Conda environment with Micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| cache-environment: true | |
| environment-file: environment.yml | |
| # TODO: lock in specific version once workflow is stable | |
| - name: Development install | |
| run: pip install -e . | |
| - name: Configure AWS Credentials | |
| uses: aws-actions/configure-aws-credentials@v4 | |
| with: | |
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| aws-region: us-west-2 | |
| - name: Run Hyp3-ISCE2 | |
| env: | |
| EARTHDATA_USERNAME: ${{ secrets.EARTHDATA_USERNAME }} | |
| EARTHDATA_PASSWORD: ${{ secrets.EARTHDATA_PASSWORD}} | |
| ESA_USERNAME: ${{ secrets.ESA_USERNAME }} | |
| ESA_PASSWORD: ${{ secrets.ESA_PASSWORD}} | |
| run: | | |
| python -m hyp3_isce2 ++process insar_tops_fufiters \ | |
| ${{ inputs.reference }} \ | |
| ${{ inputs.secondary }} \ | |
| --burstId ${{ inputs.burstId }} \ | |
| --polarization ${{ inputs.polarization }} \ | |
| --looks ${{ inputs.looks }} \ | |
| --apply-water-mask False | |
| - name: Report Machine Stats | |
| run: | | |
| nproc | |
| free -h | |
| df -h | |
| pwd | |
| ls -ltrh | |
| - name: Get Dates for Output Subfolder Name | |
| env: | |
| REF: ${{ inputs.reference }} | |
| SEC: ${{ inputs.secondary }} | |
| run: | | |
| PREFIX=${REF:17:8}_${SEC:17:8} | |
| echo "PREFIX=${PREFIX}" >> $GITHUB_ENV | |
| # TODO: add conditional for s3bucket / change testing->production when ready | |
| - name: Upload to AWS S3 | |
| env: | |
| BURSTID: ${{ inputs.burstId }} | |
| run: | | |
| OUTDIR=`ls -d S1_*` | |
| aws s3 sync $OUTDIR s3://fufiters/testing/insar/$BURSTID/$PREFIX/$OUTDIR | |
| #TODO: boolean flag to save to GitHub Artifacts? | |
| - name: Upload to GitHub Artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: ${{ env.PREFIX }} | |
| path: S1_*INT* |