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add 'synapses restricted to region' (#755)
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* add synapses_restricted_to_region

* add example of usage

* add property chain

* amend creation annotations

* making requested definition and comment fixes

* use `terms:contributor` instead of `terms:creator`

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Co-authored-by: Anita Caron <anitac@ebi.ac.uk>
Co-authored-by: Anita Caron <anitacaron@users.noreply.github.com>
Co-authored-by: Chris Mungall <cjm@berkeleybop.org>
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4 people authored Dec 2, 2024
1 parent 3bcdbbe commit 1566c79
Showing 1 changed file with 13 additions and 0 deletions.
13 changes: 13 additions & 0 deletions src/ontology/ro-edit.owl
Original file line number Diff line number Diff line change
Expand Up @@ -562,6 +562,7 @@ Declaration(ObjectProperty(obo:RO_0013006))
Declaration(ObjectProperty(obo:RO_0013007))
Declaration(ObjectProperty(obo:RO_0013008))
Declaration(ObjectProperty(obo:RO_0013009))
Declaration(ObjectProperty(obo:RO_0013010))
Declaration(ObjectProperty(obo:RO_0014001))
Declaration(ObjectProperty(obo:RO_0015001))
Declaration(ObjectProperty(obo:RO_0015002))
Expand Down Expand Up @@ -6461,6 +6462,17 @@ AnnotationAssertion(rdfs:comment obo:RO_0013009 "Not restricting range to 'cell'
AnnotationAssertion(rdfs:label obo:RO_0013009 "sends synaptic output to cell"@en)
SubObjectPropertyOf(obo:RO_0013009 obo:RO_0002120)

# Object Property: obo:RO_0013010 (synapses restricted to region)

AnnotationAssertion(obo:IAO_0000112 obo:RO_0013010 "An optic lobe intrinsic neuron has its synapses restricted to optic lobe neuropil.")
AnnotationAssertion(obo:IAO_0000115 obo:RO_0013010 "A relationship between a neuron and a region, where all of the functionally relevant input and output synapses are in that region.")
AnnotationAssertion(terms:contributor obo:RO_0013010 <https://orcid.org/0000-0002-1373-1705>)
AnnotationAssertion(terms:date obo:RO_0013010 "2023-08-17T12:17:24Z"^^xsd:dateTime)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:RO_0013010 "intrinsic to")
AnnotationAssertion(rdfs:comment obo:RO_0013010 "This relation may still be used if a very small number of synapses fall slightly outside the boundaries of the region, but any class using this relation should not have another restriction using this relation to another non-overlapping region.")
AnnotationAssertion(rdfs:label obo:RO_0013010 "synapses restricted to region"@en)
SubObjectPropertyOf(obo:RO_0013010 obo:RO_0013001)

# Object Property: obo:RO_0014001 (disease has infectious agent)

AnnotationAssertion(obo:IAO_0000115 obo:RO_0014001 "A relationship between a disease and an infectious agent where the material basis of the disease is an infection with some infectious agent.")
Expand Down Expand Up @@ -7303,6 +7315,7 @@ SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013001 obo:BFO_0000050) obo:RO_0
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013002 obo:BFO_0000050) obo:RO_0013002)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013003 obo:BFO_0000050) obo:RO_0013003)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013007 obo:BFO_0000050) obo:RO_0013007)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0013010 obo:BFO_0000050) obo:RO_0013010)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0015001 obo:RO_0015003) obo:RO_0015001)
SubObjectPropertyOf(ObjectPropertyChain(obo:RO_0020104 obo:BFO_0000050 obo:RO_0020105) obo:RO_0002100)
SubObjectPropertyOf(ObjectPropertyChain(ObjectInverseOf(obo:BFO_0000066) obo:RO_0002234) obo:RO_0003000)
Expand Down

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