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  • The Scripps Research Institute
  • San Diego

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  1. Disbiome_data Disbiome_data Public

    Parse the data from Disbiome database

    Python

  2. HMDB_data HMDB_data Public

    Parser for HMDB database

    Python

  3. GMMAD2_data GMMAD2_data Public

    Parser for GMMDA2 database (microbes-metabolites, microbes-diseases, and metabolites-diseases)

    Python

  4. MAGNN_MKG MAGNN_MKG Public

    Jupyter Notebook

  5. MAHN MAHN Public

    Forked from LUTGraphGroup/MAHN_Liuwenzhi

    Predicting disease-metabolite associations based on the metapath aggregation of tripartite heterogeneous networks

    Jupyter Notebook 1

  6. PINNACLE PINNACLE Public

    Forked from mims-harvard/PINNACLE

    Contextual AI models for single-cell protein biology

    Python