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Merge pull request #19 from highmed/hotfix/18_case-sensitive-aql
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Hotfix/18 case sensitive aql
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hhund authored Apr 20, 2021
2 parents d957d49 + 1835dde commit e6707c7
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Showing 54 changed files with 67 additions and 66 deletions.
2 changes: 1 addition & 1 deletion dsf-bpe-process-feasibility/pom.xml
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Expand Up @@ -8,7 +8,7 @@
<parent>
<artifactId>dsf-bpe-highmed-processes-pom</artifactId>
<groupId>org.highmed.dsf</groupId>
<version>0.4.0</version>
<version>0.4.1</version>
</parent>

<dependencies>
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Expand Up @@ -20,7 +20,7 @@ public interface ConstantsFeasibility
// (if I already know the cohort size in my MeDIC)
int MIN_PARTICIPATING_MEDICS = 3;
int MIN_COHORT_DEFINITIONS = 1;
String FEASIBILITY_QUERY_PREFIX = "select count";
String FEASIBILITY_QUERY_PREFIX = "SELECT COUNT";

String CODESYSTEM_HIGHMED_FEASIBILITY = "http://highmed.org/fhir/CodeSystem/feasibility";
String CODESYSTEM_HIGHMED_FEASIBILITY_VALUE_PARTICIPATING_MEDIC_CORRELATION_KEY = "medic-correlation-key";
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Expand Up @@ -18,7 +18,7 @@

public class FeasibilityProcessPluginDefinition implements ProcessPluginDefinition
{
public static final String VERSION = "0.4.0";
public static final String VERSION = "0.4.1";

@Override
public String getName()
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Expand Up @@ -48,8 +48,9 @@ protected void doExecute(DelegateExecution execution) throws Exception
Map<String, String> queries = new HashMap<>();

Task leadingTask = getLeadingTaskFromExecutionVariables();
cohorts.forEach(group -> {
String aqlQuery = groupHelper.extractAqlQuery(group).toLowerCase();
cohorts.forEach(group ->
{
String aqlQuery = groupHelper.extractAqlQuery(group);

String groupId = group.getId();
if (!aqlQuery.startsWith(ConstantsFeasibility.FEASIBILITY_QUERY_PREFIX))
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Expand Up @@ -64,6 +64,6 @@ private Map<String, String> modifyQueries(Map<String, String> queries)
protected String replaceSelectCountWithSelectMpiId(String value)
{
// TODO Implement correct replacement for default id query
return value.replace("select count(e)", "select e" + ehrIdColumnPath + " as EHRID");
return value.replace("SELECT COUNT(e)", "SELECT e" + ehrIdColumnPath + " as EHRID");
}
}
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@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<bpmn:definitions xmlns:bpmn="http://www.omg.org/spec/BPMN/20100524/MODEL" xmlns:bpmndi="http://www.omg.org/spec/BPMN/20100524/DI" xmlns:di="http://www.omg.org/spec/DD/20100524/DI" xmlns:dc="http://www.omg.org/spec/DD/20100524/DC" xmlns:camunda="http://camunda.org/schema/1.0/bpmn" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" id="Definitions_1yff9tp" targetNamespace="http://bpmn.io/schema/bpmn" exporter="Camunda Modeler" exporterVersion="3.7.1">
<bpmn:process id="computeFeasibility" isExecutable="true" camunda:versionTag="0.4.0">
<bpmn:process id="computeFeasibility" isExecutable="true" camunda:versionTag="0.4.1">
<bpmn:subProcess id="SubProcess_1gopxt4">
<bpmn:incoming>SequenceFlow_1lfe4wr</bpmn:incoming>
<bpmn:outgoing>SequenceFlow_0xxpamp</bpmn:outgoing>
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<camunda:inputOutput>
<camunda:inputParameter name="processDefinitionKey">requestFeasibility</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-multi-medic-result-feasibility</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="messageName">resultMultiMedicFeasibilityMessage</camunda:inputParameter>
</camunda:inputOutput>
</bpmn:extensionElements>
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<camunda:inputOutput>
<camunda:inputParameter name="processDefinitionKey">requestFeasibility</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-multi-medic-error-feasibility</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="messageName">errorMultiMedicFeasibilityMessage</camunda:inputParameter>
</camunda:inputOutput>
</bpmn:extensionElements>
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@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<bpmn:definitions xmlns:bpmn="http://www.omg.org/spec/BPMN/20100524/MODEL" xmlns:bpmndi="http://www.omg.org/spec/BPMN/20100524/DI" xmlns:di="http://www.omg.org/spec/DD/20100524/DI" xmlns:dc="http://www.omg.org/spec/DD/20100524/DC" xmlns:camunda="http://camunda.org/schema/1.0/bpmn" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" id="Definitions_0drkcb5" targetNamespace="http://bpmn.io/schema/bpmn" exporter="Camunda Modeler" exporterVersion="3.7.1">
<bpmn:process id="executeFeasibility" isExecutable="true" camunda:versionTag="0.4.0">
<bpmn:process id="executeFeasibility" isExecutable="true" camunda:versionTag="0.4.1">
<bpmn:serviceTask id="checkResults" name="check results" camunda:class="org.highmed.dsf.bpe.service.CheckSingleMedicResults">
<bpmn:incoming>SequenceFlow_0q803rh</bpmn:incoming>
<bpmn:outgoing>SequenceFlow_04ouilq</bpmn:outgoing>
Expand All @@ -25,7 +25,7 @@
<bpmn:extensionElements>
<camunda:inputOutput>
<camunda:inputParameter name="messageName">resultSingleMedicFeasibilityMessage</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="processDefinitionKey">computeFeasibility</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-single-medic-result-feasibility</camunda:inputParameter>
</camunda:inputOutput>
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@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<bpmn:definitions xmlns:bpmn="http://www.omg.org/spec/BPMN/20100524/MODEL" xmlns:bpmndi="http://www.omg.org/spec/BPMN/20100524/DI" xmlns:di="http://www.omg.org/spec/DD/20100524/DI" xmlns:dc="http://www.omg.org/spec/DD/20100524/DC" xmlns:camunda="http://camunda.org/schema/1.0/bpmn" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" id="Definitions_0inb4ax" targetNamespace="http://bpmn.io/schema/bpmn" exporter="Camunda Modeler" exporterVersion="3.7.1">
<bpmn:process id="requestFeasibility" isExecutable="true" camunda:versionTag="0.4.0">
<bpmn:process id="requestFeasibility" isExecutable="true" camunda:versionTag="0.4.1">
<bpmn:startEvent id="StartEvent" name="start">
<bpmn:outgoing>SequenceFlow_11k77gx</bpmn:outgoing>
<bpmn:messageEventDefinition id="MessageEventDefinition_10c2suu" messageRef="Message_1pq9qxp" />
Expand All @@ -13,7 +13,7 @@
<bpmn:extensionElements>
<camunda:inputOutput>
<camunda:inputParameter name="processDefinitionKey">executeFeasibility</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="messageName">executeFeasibilityMessage</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-execute-feasibility</camunda:inputParameter>
</camunda:inputOutput>
Expand All @@ -34,7 +34,7 @@
<bpmn:extensionElements>
<camunda:inputOutput>
<camunda:inputParameter name="processDefinitionKey">computeFeasibility</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="messageName">computeFeasibilityMessage</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-compute-feasibility</camunda:inputParameter>
</camunda:inputOutput>
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Expand Up @@ -78,7 +78,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<publisher value="HiGHmed" />
<contact>
<name value="HiGHmed" />
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Expand Up @@ -52,7 +52,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<publisher value="HiGHmed" />
<contact>
<name value="HiGHmed" />
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Expand Up @@ -110,7 +110,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<publisher value="HiGHmed" />
<contact>
<name value="HiGHmed" />
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Expand Up @@ -13,7 +13,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false"/>
<date value="2021-01-26"/>
<date value="2021-04-20"/>
<publisher value="HiGHmed"/>
<description value="CodeSystem with standard values for feasibility processes"/>
<caseSensitive value="true"/>
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -13,7 +13,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -13,7 +13,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false"/>
<date value="2021-01-26"/>
<date value="2021-04-20"/>
<publisher value="HiGHmed"/>
<description value="ValueSet with standard values for feasibility processes"/>
<immutable value="true"/>
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2 changes: 1 addition & 1 deletion dsf-bpe-process-local-services/pom.xml
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Expand Up @@ -9,7 +9,7 @@
<parent>
<artifactId>dsf-bpe-highmed-processes-pom</artifactId>
<groupId>org.highmed.dsf</groupId>
<version>0.4.0</version>
<version>0.4.1</version>
</parent>

<dependencies>
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Expand Up @@ -18,10 +18,10 @@

public class LocalServicesProcessPluginDefinition implements ProcessPluginDefinition
{
public static final String VERSION = "0.4.0";
public static final String VERSION = "0.4.1";

private static final String DEPENDENCY_FEASIBILITY_VERSION = "0.4.0";
private static final String DEPENDENCY_FEASIBILITY_NAME_AND_VERSION = "dsf-bpe-process-feasibility-0.4.0";
private static final String DEPENDENCY_FEASIBILITY_VERSION = "0.4.1";
private static final String DEPENDENCY_FEASIBILITY_NAME_AND_VERSION = "dsf-bpe-process-feasibility-0.4.1";

@Override
public String getName()
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@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<bpmn:definitions xmlns:bpmn="http://www.omg.org/spec/BPMN/20100524/MODEL" xmlns:bpmndi="http://www.omg.org/spec/BPMN/20100524/DI" xmlns:di="http://www.omg.org/spec/DD/20100524/DI" xmlns:dc="http://www.omg.org/spec/DD/20100524/DC" xmlns:camunda="http://camunda.org/schema/1.0/bpmn" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" id="Definitions_0drkcb5" targetNamespace="http://bpmn.io/schema/bpmn" exporter="Camunda Modeler" exporterVersion="3.7.1">
<bpmn:process id="localServicesIntegration" isExecutable="true" camunda:versionTag="0.4.0">
<bpmn:process id="localServicesIntegration" isExecutable="true" camunda:versionTag="0.4.1">
<bpmn:serviceTask id="checkResults" name="check results" camunda:class="org.highmed.dsf.bpe.service.CheckSingleMedicResults">
<bpmn:incoming>SequenceFlow_0q803rh</bpmn:incoming>
<bpmn:outgoing>SequenceFlow_04ouilq</bpmn:outgoing>
Expand Down Expand Up @@ -95,7 +95,7 @@
<bpmn:extensionElements>
<camunda:inputOutput>
<camunda:inputParameter name="messageName">resultSingleMedicFeasibilityMessage</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="processDefinitionKey">computeFeasibility</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-single-medic-result-feasibility</camunda:inputParameter>
</camunda:inputOutput>
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Expand Up @@ -47,7 +47,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false"/>
<date value="2021-01-26"/>
<date value="2021-04-20"/>
<publisher value="HiGHmed"/>
<contact>
<name value="HiGHmed"/>
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Expand Up @@ -13,7 +13,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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2 changes: 1 addition & 1 deletion dsf-bpe-process-ping/pom.xml
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Expand Up @@ -7,7 +7,7 @@
<parent>
<groupId>org.highmed.dsf</groupId>
<artifactId>dsf-bpe-highmed-processes-pom</artifactId>
<version>0.4.0</version>
<version>0.4.1</version>
</parent>

<dependencies>
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Expand Up @@ -15,7 +15,7 @@

public class PingProcessPluginDefinition implements ProcessPluginDefinition
{
public static final String VERSION = "0.4.0";
public static final String VERSION = "0.4.1";

@Override
public String getName()
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4 changes: 2 additions & 2 deletions dsf-bpe-process-ping/src/main/resources/bpe/ping.bpmn
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@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<bpmn:definitions xmlns:bpmn="http://www.omg.org/spec/BPMN/20100524/MODEL" xmlns:bpmndi="http://www.omg.org/spec/BPMN/20100524/DI" xmlns:di="http://www.omg.org/spec/DD/20100524/DI" xmlns:dc="http://www.omg.org/spec/DD/20100524/DC" xmlns:camunda="http://camunda.org/schema/1.0/bpmn" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" id="Definitions_0azvmx1" targetNamespace="http://bpmn.io/schema/bpmn" exporter="Camunda Modeler" exporterVersion="3.7.1">
<bpmn:process id="ping" isExecutable="true" camunda:versionTag="0.4.0">
<bpmn:process id="ping" isExecutable="true" camunda:versionTag="0.4.1">
<bpmn:sequenceFlow id="SequenceFlow_0k1j79c" sourceRef="StartEvent_1" targetRef="selectTargets" />
<bpmn:sequenceFlow id="SequenceFlow_05ia6lz" sourceRef="selectTargets" targetRef="sendPing" />
<bpmn:serviceTask id="selectTargets" name="selectTargets" camunda:class="org.highmed.dsf.bpe.service.SelectPingTargets">
Expand All @@ -11,7 +11,7 @@
<bpmn:extensionElements>
<camunda:inputOutput>
<camunda:inputParameter name="processDefinitionKey">pong</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="messageName">pingMessage</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-ping</camunda:inputParameter>
</camunda:inputOutput>
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4 changes: 2 additions & 2 deletions dsf-bpe-process-ping/src/main/resources/bpe/pong.bpmn
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@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<bpmn:definitions xmlns:bpmn="http://www.omg.org/spec/BPMN/20100524/MODEL" xmlns:bpmndi="http://www.omg.org/spec/BPMN/20100524/DI" xmlns:di="http://www.omg.org/spec/DD/20100524/DI" xmlns:dc="http://www.omg.org/spec/DD/20100524/DC" xmlns:camunda="http://camunda.org/schema/1.0/bpmn" id="Definitions_15v05m6" targetNamespace="http://bpmn.io/schema/bpmn" exporter="Camunda Modeler" exporterVersion="3.5.0">
<bpmn:process id="pong" isExecutable="true" camunda:versionTag="0.4.0">
<bpmn:process id="pong" isExecutable="true" camunda:versionTag="0.4.1">
<bpmn:startEvent id="StartEvent_1">
<bpmn:outgoing>SequenceFlow_07w11cw</bpmn:outgoing>
<bpmn:messageEventDefinition messageRef="Message_0u91abp" />
Expand All @@ -10,7 +10,7 @@
<bpmn:extensionElements>
<camunda:inputOutput>
<camunda:inputParameter name="messageName">pongMessage</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.0</camunda:inputParameter>
<camunda:inputParameter name="versionTag">0.4.1</camunda:inputParameter>
<camunda:inputParameter name="processDefinitionKey">ping</camunda:inputParameter>
<camunda:inputParameter name="profile">http://highmed.org/fhir/StructureDefinition/task-pong</camunda:inputParameter>
</camunda:inputOutput>
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Expand Up @@ -102,7 +102,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<publisher value="HiGHmed" />
<contact>
<name value="HiGHmed" />
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Expand Up @@ -58,7 +58,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<publisher value="HiGHmed" />
<contact>
<name value="HiGHmed" />
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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Expand Up @@ -12,7 +12,7 @@
<!-- status managed by bpe -->
<status value="unknown" />
<experimental value="false" />
<date value="2021-01-26" />
<date value="2021-04-20" />
<fhirVersion value="4.0.1" />
<kind value="resource" />
<abstract value="false" />
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2 changes: 1 addition & 1 deletion dsf-bpe-process-update-allow-list/pom.xml
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Expand Up @@ -7,7 +7,7 @@
<parent>
<groupId>org.highmed.dsf</groupId>
<artifactId>dsf-bpe-highmed-processes-pom</artifactId>
<version>0.4.0</version>
<version>0.4.1</version>
</parent>

<dependencies>
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Expand Up @@ -17,7 +17,7 @@

public class UpdateAllowListProcessPluginDefinition implements ProcessPluginDefinition
{
public static final String VERSION = "0.4.0";
public static final String VERSION = "0.4.1";

@Override
public String getName()
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@@ -1,6 +1,6 @@
<?xml version="1.0" encoding="UTF-8"?>
<bpmn:definitions xmlns:bpmn="http://www.omg.org/spec/BPMN/20100524/MODEL" xmlns:bpmndi="http://www.omg.org/spec/BPMN/20100524/DI" xmlns:dc="http://www.omg.org/spec/DD/20100524/DC" xmlns:camunda="http://camunda.org/schema/1.0/bpmn" xmlns:di="http://www.omg.org/spec/DD/20100524/DI" id="Definitions_1yb5vw3" targetNamespace="http://bpmn.io/schema/bpmn" exporter="Camunda Modeler" exporterVersion="4.2.0">
<bpmn:process id="downloadAllowList" isExecutable="true" camunda:versionTag="0.4.0">
<bpmn:process id="downloadAllowList" isExecutable="true" camunda:versionTag="0.4.1">
<bpmn:sequenceFlow id="SequenceFlow_0bbhq2r" sourceRef="StartEvent_1" targetRef="downloadAllowListTask" />
<bpmn:endEvent id="EndEvent_0xd0x8k">
<bpmn:incoming>SequenceFlow_0oyvmcd</bpmn:incoming>
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