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Merge pull request #6 from genome/dpfix
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rolling back pysam version
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chrisamiller authored May 7, 2021
2 parents 931d2c6 + 34f25c2 commit f4b5afa
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -14,5 +14,5 @@ COPY mapq0_vcf_filter.sh /usr/bin/mapq0_vcf_filter.sh
COPY add_mq0_and_filter.py /usr/bin/add_mq0_and_filter.py
RUN chmod +x /usr/bin/mapq0_vcf_filter.sh /usr/bin/add_mq0_and_filter.py
RUN pip3 install cython==0.29.19
RUN pip3 install pysam==0.16.0.1
RUN pip3 install pysam==0.15.4
RUN pip3 install pysamstats==1.1.2

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