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adding cython dep which only fails on dockerhub
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chrisamiller committed May 28, 2020
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Expand Up @@ -26,5 +26,6 @@ RUN cd /tmp/ \
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COPY mapq0_vcf_filter.sh /usr/bin/mapq0_vcf_filter.sh
RUN chmod +x /usr/bin/mapq0_vcf_filter.sh
RUN pip3 install cython==0.29.19
RUN pip3 install pysam==0.15.4
RUN pip3 install pysamstats==1.1.2

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