cicd: update precommit configs

cancervariants · Nov 13, 2024 · bce963e · bce963e
1 parent 5a9b87a
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diff --git a/.github/workflows/checks.yaml b/.github/workflows/checks.yaml
@@ -64,6 +64,26 @@ jobs:
       - name: Check style
         run: python3 -m ruff check . && python3 -m ruff format --check .
 
+  precommit_hooks:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        hook:
+          - "end-of-file-fixer"
+          - "trailing-whitespace"
+          - "mixed-line-ending"
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Set up Python 3.12
+        uses: actions/setup-python@v5
+        with:
+          python-version: 3.12
+
+      - uses: pre-commit/action@v3.0.1
+        with:
+          extra_args: ${{ matrix.hook.args }} --all-files
+
   docs:
     runs-on: ubuntu-latest
     env:

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -10,6 +10,8 @@ repos:
   - id: check-merge-conflict
   - id: detect-aws-credentials
     args: [ --allow-missing-credentials ]
+  - id: mixed-line-ending
+    args: [ --fix=lf ]
 - repo: https://github.com/astral-sh/ruff-pre-commit
   rev: v0.5.0
   hooks: