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add a make test
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Chenxi Zhou committed Sep 30, 2024
1 parent 807df22 commit 732523f
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2 changes: 1 addition & 1 deletion scripts/run_test.sh
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ hicaln="${test}.hic.bed.gz" # could be .bed, .bam or .bin file

(${ROOT_DIR}/../juicer post ${TEST_OUTDIR}/test_out.JBAT.assembly ${TEST_OUTDIR}/test_out.JBAT.liftover.agp ${TEST_OUTDIR}/LYZE01.contigs.fasta.gz -o ${TEST_OUTDIR}/test_out.JBAT >/dev/null 2>&1 && echo "Juicer post DONE.") || { echo "Juicer post FAILED."; rm -rf ${TEST_OUTDIR}; exit 1; }

# rm -rf ${TEST_OUTDIR}
rm -rf ${TEST_OUTDIR}

echo "Successful."

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