update resource file paths #119
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
jobs: | |
checks: | |
name: Checks | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v2 | |
- name: Setup Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: 3.8 | |
- name: Use pip cache | |
uses: actions/cache@v2 | |
with: | |
path: ~/.cache/pip | |
key: pip-${{ hashFiles('**/requirements*.txt') }} | |
restore-keys: | | |
pip- | |
- name: Install dependencies | |
run: | | |
pip install wheel | |
pip install -r requirements-dev.txt | |
pip install hail gnomad | |
- name: Check formatting | |
run: black --check . | |
- name: Check docstrings | |
run: pydocstyle | |
- name: Run Pylint | |
run: pylint gnomad_mitochondria |