Aim

Usage

./wormtracker imgs_dirs out_dirs <-a>

Initial worm position --> generate initial worm body --> track new worm body based on previous worm body.

Single worm version ---> Multi worm version ---> Multi worm version with GPU and/or Parallel

Name		Name	Last commit message	Last commit date
Latest commit History 42 Commits
.ipynb_checkpoints		.ipynb_checkpoints
UnitsTest		UnitsTest
cpp		cpp
results		results
src_cpp		src_cpp
test_image		test_image
track_ref		track_ref
tracklib		tracklib
.DS_Store		.DS_Store
._.DS_Store		._.DS_Store
.gitignore		.gitignore
BgNormal.m		BgNormal.m
BgThresh.m		BgThresh.m
LocateWormBodyMiddle.m		LocateWormBodyMiddle.m
LocateWormCentre.m		LocateWormCentre.m
NextFrameNearestPoint.m		NextFrameNearestPoint.m
README.md		README.md
README_Matlab		README_Matlab
RemoveBigArea.m		RemoveBigArea.m
SingleImageProcessing.m		SingleImageProcessing.m
StatisticsRepresent.py		StatisticsRepresent.py
StatisticsRepresent2.py		StatisticsRepresent2.py
Todo.md		Todo.md
Track.gif		Track.gif
detecting.py		detecting.py
dist_move.ipynb		dist_move.ipynb
distplot.py		distplot.py
fluoplot.py		fluoplot.py
main.m		main.m
main_imgeprocessing.m		main_imgeprocessing.m
par_test.py		par_test.py
partical_tracking.ipynb		partical_tracking.ipynb
plt.py		plt.py
tiff2avi.sh		tiff2avi.sh
tracking.py		tracking.py
tracking_par.py		tracking_par.py
trackingroi.py		trackingroi.py
wormtracker.py		wormtracker.py