sysimage instead of app in docker container

TARGENE · Dec 23, 2023 · ccc2a07 · ccc2a07
1 parent f8358ff
commit ccc2a07
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Showing 4 changed files with 14 additions and 3 deletions.
diff --git a/deps/build_app.jl b/deps/build_app.jl
@@ -1,2 +1,6 @@
 using PackageCompiler
-PackageCompiler.create_app(".", "tmle", precompile_execution_file="deps/execute.jl", include_lazy_artifacts=true)
+PackageCompiler.create_app(".", "tmle", 
+    lib_name="tmle",
+    precompile_execution_file="deps/execute.jl", 
+    include_lazy_artifacts=true
+)
diff --git a/deps/build_sysimage.jl b/deps/build_sysimage.jl
@@ -0,0 +1,6 @@
+using PackageCompiler
+PackageCompiler.create_sysimage(
+    ["TargetedEstimation"], 
+    sysimage_path="TMLESysimage.so", 
+    precompile_execution_file="deps/execute.jl", 
+)
diff --git a/docker/Dockerfile b/docker/Dockerfile
@@ -20,7 +20,7 @@ WORKDIR /TargetedEstimation.jl
 RUN julia --project -e'using Pkg; Pkg.instantiate(); Pkg.resolve(); Pkg.precompile()'
 
 # Build CLI
-RUN julia --project --startup-file=no deps/build_app.jl
+RUN julia --project --startup-file=no deps/build_sysimage.jl
 
 # Test the CLI runs
-RUN /TargetedEstimation.jl/tmle/bin/TargetedEstimation tmle data/sample_dataset.csv
+RUN julia --startup-file=no --project -JTMLESysimage.so tmle.jl tmle data/sample_dataset.csv
diff --git a/tmle.jl b/tmle.jl
@@ -0,0 +1 @@
+using TargetedEstimation; main()