Code

Upgrade validation methods#1911

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Merged

stephprince merged 46 commits intorelease-3.0.0NeurodataWithoutBorders/pynwb:release-3.0.0from upgrade-validatorNeurodataWithoutBorders/pynwb:upgrade-validatorCopy head branch name to clipboardJan 3, 2025

+465-342

Commits

Commits on May 29, 2024

• reconcile io path validator differences

  stephprince

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  dbadbd5

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• make io and path output the same

  stephprince

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  fe81ad3

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• update tests for io validation

  stephprince

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  18826f8

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• add test that io and path output is same

  stephprince

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  923c1d3

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• update tests for io output with status

  stephprince

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  41d9b9d

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• add validate helper function and fix status tracking

  stephprince

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  8c921a3

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• update arguments and status checks

  stephprince

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  95556a8

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• fix test comparing io and path outputs

  stephprince

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  87b1f1e

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• update error message for io inputs

  stephprince

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  6a748a5

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• add tests to compare all io and path outputs

  stephprince

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• remove script for testing

  stephprince

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Commits on Nov 12, 2024

• Merge branch 'dev' into upgrade-validator

  stephprince

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Commits on Nov 13, 2024

• add initial json export option

  stephprince

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  25fc892

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• update validator inputs and outputs, remove hdf5io references

  stephprince

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  6caa46b

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• update tests for non status output

  stephprince

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  4c48c67

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• add tests for json validator output

  stephprince

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• move pynwb.validate into validation module

  stephprince

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• update json report

  stephprince

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  d791f6f

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• add validation entry point

  stephprince

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• separate cli and validation function files

  stephprince

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Commits on Nov 21, 2024

• update validation tutorial

  stephprince

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• move get_backend to pynwb init

  stephprince

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Commits on Nov 23, 2024

• update example validation for new io behavior

  stephprince

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• update ruff ignores

  stephprince

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  f0912f3

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• fix test comments

  stephprince

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• Merge branch 'dev' into upgrade-validator

  stephprince

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Commits on Nov 27, 2024

• update CHANGELOG

  stephprince

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  8e5aa62

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• add tests for _get_backend

  stephprince

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  72779d5

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• update backend imports for optional zarr

  stephprince

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• Merge branch 'dev' into upgrade-validator

  stephprince

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  0745bd2

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• fix test name

  stephprince

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  f319e88

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• update test filename

  stephprince

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Commits on Dec 16, 2024

• close io after validation

  stephprince

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  35181ed

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• fix test assertion

  stephprince

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  d2f7561

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• add condition for ros3 validation

  stephprince

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Commits on Dec 19, 2024

• Merge branch 'dev' into upgrade-validator

  stephprince

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Commits on Dec 22, 2024

• Update CHANGELOG.md

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Commits on Dec 23, 2024

• Apply suggestions from code review

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  stephprince

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  rly

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• Merge branch 'dev' into upgrade-validator

  stephprince

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  d8d301d

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• update cli args and docs

  stephprince

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  9ff9eba

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• fix formatting

  stephprince

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• update json-file-path argname

  stephprince

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• update extension tutorial

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• Apply suggestions from code review

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  rly

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• warn for positional args in validation

  stephprince

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  e91a483

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Commits on Jan 2, 2025

• Merge branch 'release-3.0.0' into upgrade-validator

  stephprince

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  146d0e1

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