Topological metrics

dev-requirements.txt

@@ -1,5 +1,5 @@
 #
-# This file is autogenerated by pip-compile with Python 3.11
+# This file is autogenerated by pip-compile with Python 3.10
 # by the following command:
 #
 #    pip-compile --extra=dev --output-file=dev-requirements.txt
@@ -68,10 +68,14 @@ cramjam==2.7.0
     # via fastparquet
 cycler==0.12.1
     # via matplotlib
+cytoolz==0.12.3
+    # via swmmanywhere (pyproject.toml)
 dill==0.3.7
     # via multiprocess
 distlib==0.3.8
     # via virtualenv
+exceptiongroup==1.2.0
+    # via pytest
 fastparquet==2023.10.1
     # via swmmanywhere (pyproject.toml)
 filelock==3.13.1
@@ -93,14 +97,9 @@ geojson==3.1.0
 geopandas==0.14.2
     # via
     #   osmnx
-    #   snkit
     #   swmmanywhere (pyproject.toml)
 geopy==2.4.1
     # via swmmanywhere (pyproject.toml)
-gitdb==4.0.11
-    # via gitpython
-gitpython==3.1.41
-    # via swmmanywhere (pyproject.toml)
 identify==2.5.33
     # via pre-commit
 idna==3.6
@@ -109,6 +108,8 @@ imageio==2.33.1
     # via scikit-image
 iniconfig==2.0.0
     # via pytest
+joblib==1.3.2
+    # via swmmanywhere (pyproject.toml)
 julian==0.14
     # via pyswmm
 kiwisolver==1.4.5
@@ -133,8 +134,11 @@ mypy-extensions==1.0.0
     # via mypy
 netcdf4==1.6.5
     # via swmmanywhere (pyproject.toml)
+netcomp @ git+https://github.com/barneydobson/NetComp.git
+    # via swmmanywhere (pyproject.toml)
 networkx==3.2.1
     # via
+    #   netcomp
     #   osmnx
     #   scikit-image
     #   swmmanywhere (pyproject.toml)
@@ -150,6 +154,7 @@ numpy==1.26.3
     #   imageio
     #   matplotlib
     #   netcdf4
+    #   netcomp
     #   numba
     #   osmnx
     #   pandas
@@ -262,6 +267,7 @@ scikit-image==0.22.0
     # via pysheds
 scipy==1.12.0
     # via
+    #   netcomp
     #   pysheds
     #   salib
     #   scikit-image
@@ -270,22 +276,27 @@ shapely==2.0.2
     # via
     #   geopandas
     #   osmnx
-    #   snkit
     #   swmmanywhere (pyproject.toml)
 six==1.16.0
     # via
     #   fiona
     #   python-dateutil
-smmap==5.0.1
-    # via gitdb
-snkit==1.9.0
-    # via swmmanywhere (pyproject.toml)
 snuggs==1.4.7
     # via rasterio
 swmm-toolkit==0.15.3
     # via pyswmm
 tifffile==2024.1.30
     # via scikit-image
+tomli==2.0.1
+    # via
+    #   build
+    #   coverage
+    #   mypy
+    #   pip-tools
+    #   pyproject-hooks
+    #   pytest
+toolz==0.12.1
+    # via cytoolz
 tqdm==4.66.2
     # via
     #   cdsapi

pyproject.toml

@@ -25,14 +25,17 @@ classifiers = [
 dependencies = [
   # TODO definitely don't need all of these
   "cdsapi",
+  "cytoolz",
   "fastparquet",
   "fiona",
   "geopandas",
   "geopy",
   "GitPython",
+  "joblib",
   "loguru",
   "matplotlib",
   "netcdf4",
+  "netcomp@ git+https://github.com/barneydobson/NetComp.git",
   "networkx",
   "numpy",
   "osmnx",
@@ -47,7 +50,6 @@ dependencies = [
   "SALib",
   "SciPy",
   "shapely",
-  "snkit",
   "tqdm",
   "xarray",
 ]

requirements.txt

@@ -1,5 +1,5 @@
 #
-# This file is autogenerated by pip-compile with Python 3.11
+# This file is autogenerated by pip-compile with Python 3.10
 # by the following command:
 #
 #    pip-compile
@@ -56,6 +56,8 @@ cramjam==2.7.0
     # via fastparquet
 cycler==0.12.1
     # via matplotlib
+cytoolz==0.12.3
+    # via swmmanywhere (pyproject.toml)
 dill==0.3.7
     # via multiprocess
 fastparquet==2023.10.1
@@ -75,18 +77,15 @@ geojson==3.1.0
 geopandas==0.14.2
     # via
     #   osmnx
-    #   snkit
     #   swmmanywhere (pyproject.toml)
 geopy==2.4.1
     # via swmmanywhere (pyproject.toml)
-gitdb==4.0.11
-    # via gitpython
-gitpython==3.1.41
-    # via swmmanywhere (pyproject.toml)
 idna==3.6
     # via requests
 imageio==2.33.1
     # via scikit-image
+joblib==1.3.2
+    # via swmmanywhere (pyproject.toml)
 julian==0.14
     # via pyswmm
 kiwisolver==1.4.5
@@ -105,8 +104,11 @@ multiprocess==0.70.15
     # via salib
 netcdf4==1.6.5
     # via swmmanywhere (pyproject.toml)
+netcomp @ git+https://github.com/barneydobson/NetComp.git
+    # via swmmanywhere (pyproject.toml)
 networkx==3.2.1
     # via
+    #   netcomp
     #   osmnx
     #   scikit-image
     #   swmmanywhere (pyproject.toml)
@@ -120,6 +122,7 @@ numpy==1.26.3
     #   imageio
     #   matplotlib
     #   netcdf4
+    #   netcomp
     #   numba
     #   osmnx
     #   pandas
@@ -204,6 +207,7 @@ scikit-image==0.22.0
     # via pysheds
 scipy==1.12.0
     # via
+    #   netcomp
     #   pysheds
     #   salib
     #   scikit-image
@@ -212,22 +216,19 @@ shapely==2.0.2
     # via
     #   geopandas
     #   osmnx
-    #   snkit
     #   swmmanywhere (pyproject.toml)
 six==1.16.0
     # via
     #   fiona
     #   python-dateutil
-smmap==5.0.1
-    # via gitdb
-snkit==1.9.0
-    # via swmmanywhere (pyproject.toml)
 snuggs==1.4.7
     # via rasterio
 swmm-toolkit==0.15.3
     # via pyswmm
 tifffile==2024.1.30
     # via scikit-image
+toolz==0.12.1
+    # via cytoolz
 tqdm==4.66.2
     # via
     #   cdsapi