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Eric Largy edited this page Aug 4, 2022
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Welcome to the OligoR wiki!
OligoR is divided into six interconnected modules dedicated to specific tasks:
- OligoRef computes the theoretical masses and isotopic distributions of an analyte
- MSxploR is used to import raw MS data, sum scans, select species of interest, and send data to other modules for further processing.
- MSstackR displays spectra from the species selected in MSxploR for discrete time points and performs isotopic peak picking and mono/bi-modal isotopic distribution modeling.
- TimeR filters and plots time-dependent data, calculates raw and standard-corrected intensities and mass centroid for each scan.
- HDXplotR plots HDX data from MSstackR and TimeR, and performs non-linear fitting of exchange kinetics.
- TitratR determines amounts of bound and unbound species in equilibrium titrations, and calculates response factors and dissociation constants by internal standardization.