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3D Slicer extension that provides several approaches in order to apply the anomalous spatial filters on medical images.

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CSIM-Toolkits/AnomalousFiltersExtension

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Anomalous Filters Extension

This extension aims to provide several approaches in order to apply the anomalous spatial filters on medical images. The methods provided here are numerical solution of the generalized anomalous diffusion proposed by Constantino Tsallis, which, in other words, provide a numerical solution to the porous media equation (Fokker-Planck anomalous heat equation). At the moment, the Modules available are suppose to be used on scalar volumes, mainly MRI strucutral images namely T1 and T2 weighted images. Future developments will add new functionalities in order to attenuate image noise in other imaging modalities, such as diffusion weighted images (DWI and DTI).

Example

Example

More details could be found in the documentation page

If this tool was useful to your application, please consider to cite the paper:

Anomalous diffusion process applied to magnetic resonance image enhancement. A C da S Senra Filho, C E Garrido Salmon and L O Murta Junior. (2015) Physics in Medicine & Biology, Volume 60, Number 6. DOI

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Please, note that this code is under the following license

  • Apache 2.0 - Read file: LICENSE

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3D Slicer extension that provides several approaches in order to apply the anomalous spatial filters on medical images.

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