Update README.md

Aquatic-Symbiosis-Genomics-Project · Jun 19, 2024 · 9cec7e9 · 9cec7e9
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@@ -12,3 +12,6 @@ Usage: sort_fasta.rb [options]
     -h, --help                      prints this help
     -v, --version                   print version
 ```
+* the order file is tab separated with an id and an integer (the higher, the further to the beginning it will be sorted)
+* the -l / -m options will set the score to 0 for sequences longer/shorter
+* equal scoring ids will be sorted by sequence length (with the smaller ones towards the end).