A repository for the aind-information-foraging experiment
- To deploy the Bonsai code, run
./bonsai/setup.cmd. This small script will download and regenerate the current bonsai environment (see tutorial for further details.) - To deploy the python package, simply create a virtual environment using
project.toml. It is strongly encouraged to useVSCodeandvenv.
These should only need to be installed once on a fresh new system, and are not required if simply refreshing the install or deploying to a new folder.
- Windows 10 or 11
- Visual Studio Code (highly recommended for editing code scripts and git commits)
- Git for Windows (highly recommended for cloning and manipulating this repository)
- .NET Framework 4.7.2 Developer Pack (required for intellisense when editing code scripts)
- Visual C++ Redistributable for Visual Studio 2012 (native dependency for OpenCV)
- FTDI CDM Driver 2.12.28 (serial port drivers for HARP devices)
- Spinnaker SDK 1.29.0.5 (device drivers for FLIR cameras)
- On FLIR website:
Download > archive > 1.29.0.5 > SpinnakerSDK_FULL_1.29.0.5_x64.exe
- On FLIR website:
1 - Install bonsai.sgen dotnet tool
2 - Run bonsai.sgen targeting the root schema in src/DataSchemas or run src/DataSchemas/regenerate.exe