diff --git a/README.md b/README.md
index 1888b59..76d9290 100644
--- a/README.md
+++ b/README.md
@@ -1,23 +1,6 @@
 # The Bioinformatics Toolkit
 
-RUST-backed utilities for bioinformatic data processing.
-
-
-## Get started
-
-The fastest way to get started it to download the applications found in the [Release]()https://github.com/zachcp/bioinformaticstoolkit/releases section. This project aims to demonstrate how the Rust toolchain enables efficient cross-platform support for high-performance applications. By using [Tauri](https://tauri.app/) you can write the entire frontend in  any tool that compiles to HMLT+Javascript, in this case I used [Quarto](https://quarto.org/) to take advantage of its simple composition (its mostly markdown +yaml) as well as it's built-in use of the [observable](https://github.com/observablehq/stdlib) runtime.
-
-
-### Screenshots
-
-Below are screenshots of a native application demonstrating the home page, the guide page, an example RNA secondary strucutre visualization using [rnapkin](https://github.com/ukmrs/rnapkin);statistics of a fasta file including a histrogram of sequence lengths using [noodles](https://docs.rs/noodles-fasta/latest/noodles_fasta/) for IO; and DNA translation using the [protein_translation](https://docs.rs/protein-translate/latest/protein_translate/) crate.
-
-
-![](images/intro.png)
-![](images/guide.png)
-![](images/rna.png)
-![](images/fasta_histogram)
-![](images/translation.png)
+RUST-backed utilities for bioinformatic data processing. Rust on the backend with JS on the front.
 
 
 ## Develop
@@ -33,11 +16,11 @@ cargo install tauri-cli
 # add cargo bind dir to the path
 export PATH=$PATH:~/.cargo/bin/
 
-# to develop 
-cargo-tauri dev
+# to develop
+npm run tauri dev
 
-# to package. this build is ~8MB. 
-cargo-tauri build
+# to package. this build is ~8MB.
+npm run tauri build
 
 # to test
 cd src-tauri && cargo test
@@ -46,171 +29,10 @@ cd src-tauri && cargo test -- --nocapture
 
 ```
 
+### Screenshots
 
-## Other Ideas/Tools for Rust Incorporation
-
-
-FASTX:
-  - [x] convert fasta to fastq
-  - [x] basic stats of fasta/fastq 
-  - [ ] histrogram of read lengths (possibly set max number)
-  - [ ] merge PE reads // split interleaved
-  - [ ] splitting into multiple files ( create directory ?)
-  - [ ] filter-fastx length // quality
-  - [ ] sample the fasta/x files
-  - [ ] plot: length x quality metrics ( optional hexagon plots ) 
-  - [ ] plot: coverage by location. 
-
-GFA:
-  - [ ] Utilites from [GFATK](https://docs.rs/gfatk/latest/gfatk/) including filtering
-    - [ ] GFAStats
-
-
-DNA Analysis:
-  - Digestability of DNA sequences:
-      - [ ] Search for RE locations
-      - [ ] Other Patterns to Avoid
-      - [ ] Data: Standard RE enzymes
-      - [ ] Plot: Genome View of RE sites.
-      - [ ] Global view of Palettes and coding types
-  - [ ] Insilico PCR: https://github.com/dlesl/pcr
-    - Clonifier: https://github.com/dlesl/clonifier
-  - Phenogram
-  - Pangenome TK: https://github.com/GeneDx/pgr-tk (cdep in the build)
-  - RE digest and assembly calculations
-
-
-VCF:
-  - [ ] convert
-  - [ ] concat
-  - [ ] split
-
-RNA Secondary Structure:
-  - [x] RNApkin https://lib.rs/crates/rnapkin
-
-
-rna-seq:
-    - [ ] gencounts https://github.com/NKI-GCF/gensum
-    - [ ] rust-lapper https://crates.io/crates/rust-lapper
-
-
-Taxonomy:
-  - [ ] load and display a tree file
-  - [ ] load and display kraken
-  - [ ] load and display bracken
-
-Peptides and Proteomics: 
-  - [unipept](https://crates.io/crates/umgap)
-
-
-Javascript:
-    - [SGTK](https://olga24912.github.io/SGTK/) 
-    - [ribbon](https://github.com/MariaNattestad/ribbon?tab=readme-ov-file)
-    - [jbrowse](https://jbrowse.org/jb2/docs/quickstart_web/
-    - [ideogram](https://eweitz.github.io/ideogram/differential-expression)
-    - [genomegraphviewer]()
-
-Rust Software:
-- [Pangenomer](https://github.com/marschall-lab/panacus)
-- [rust-bio](https://github.com/rust-bio/rust-bio)
-- [rust-bio-tools](https://github.com/rust-bio/rust-bio-tools)
-- [Slyph](https://github.com/bluenote-1577/sylph/wiki/sylph-cookbook)
-- [Alignoth](https://github.com/alignoth/alignoth)
-
-
-Miscelleaneous:
-  - Genome Card: e.g viz with global genome statistics.
-    - Genome name, overview, produces compounds
-  - Utilities for Codons
-  - [VCF plotein](https://vcfplotein.liigh.unam.mx/)
-  - [ASGArt](https://github.com/delehef/asgart) (cdep in the build)
-  - [UDON](https://github.com/ocxtal/udon)
-  - [GFAESTUS](https://github.com/chfi/gfaestus) (c++ dep )
-  - [BioSeq](https://github.com/jeff-k/bio-seq)
-  - [10x Genomics Rust](https://github.com/10XGenomics/rust-toolbox)
-  - [fq parser](https://crates.io/crates/fastq)
-  - [fastats](https://crates.io/crates/fakit)
-  - [fqmerge](https://crates.io/crates/fqkit)
-  - [ggcat](https://github.com/algbio/ggcat)
-  - [light motif](https://crates.io/crates/lightmotif)
-  - [liftover with crusmapr](liftover)
-  - [exon](https://docs.rs/exon/latest/exon)
-  - [phylogeny](https://docs.rs/phylogeny/latest/phylogeny/) # not much action
-  - [chemical Reaction networks](https://lib.rs/crates/rebop)
-  - [gb-io](https://lib.rs/crates/gb-io)
-  - [charming - a nive gui library](https://github.com/yuankunzhang/charming)
-  - [met map](https://lib.rs/crates/shu)
-  - [barcode counter](https://lib.rs/crates/barcode-count)
-  - [hpo](https://lib.rs/crates/hpo)
-  - nanopore read assessment: https://lib.rs/crates/nanoq#readme-read-report
-  - [niffler](https://github.com/luizirber/niffler/)
-  - [OBO Validatio](https://lib.rs/crates/fastobo-validator)
-  - [rustyms](https://lib.rs/crates/rustyms)
-  - [preotienogenic](https://lib.rs/crates/proteinogenic)
-  - [rdkit](https://lib.rs/crates/rdk)
-  - [bigwig2bam](https://lib.rs/crates/bigwig2bam)
-  - Plasmapr: https://github.com/BradyAJohnston/plasmapR
-  - [flate2](https://docs.rs/flate2/latest/flate2/)use flate2::read::MultiGzDecoder;
-  - [bio_streams](https://github.com/jeff-k/bio-streams) 
-  - [BRICK Webapp](https://brick.ink/)
-  - Streaming iterators for bioinformatics data 
-  - [quickdna](https://github.com/SecureDNA/quickdna)
-  - [Conway-Bromage-Lyndon](https://github.com/imartayan/CBL)
-  - https://github.com/weng-lab/logojs-package
-  - [fiber-seq](https://github.com/fiberseq/fibertools-rs)
-  - []()
-
-
-# bioinformatics-toolkit
-
-This is an [Observable Framework](https://observablehq.com/framework) project. To start the local preview server, run:
-
-```
-npm run dev
-```
-
-Then visit <http://localhost:3000> to preview your project.
-
-For more, see <https://observablehq.com/framework/getting-started>.
-
-## Project structure
-
-A typical Framework project looks like this:
-
-```sh
-.
-├─ docs
-│  ├─ components
-│  │  └─ timeline.js           # an importable module
-│  ├─ data
-│  │  ├─ launches.csv.js       # a data loader
-│  │  └─ events.json           # a static data file
-│  ├─ example-dashboard.md     # a page
-│  ├─ example-report.md        # another page
-│  └─ index.md                 # the home page
-├─ .gitignore
-├─ observablehq.config.ts      # the project config file
-├─ package.json
-└─ README.md
-```
-
-**`docs`** - This is the “source root” — where your source files live. Pages go here. Each page is a Markdown file. Observable Framework uses [file-based routing](https://observablehq.com/framework/routing), which means that the name of the file controls where the page is served. You can create as many pages as you like. Use folders to organize your pages.
-
-**`docs/index.md`** - This is the home page for your site. You can have as many additional pages as you’d like, but you should always have a home page, too.
-
-**`docs/data`** - You can put [data loaders](https://observablehq.com/framework/loaders) or static data files anywhere in your source root, but we recommend putting them here.
-
-**`docs/components`** - You can put shared [JavaScript modules](https://observablehq.com/framework/javascript/imports) anywhere in your source root, but we recommend putting them here. This helps you pull code out of Markdown files and into JavaScript modules, making it easier to reuse code across pages, write tests and run linters, and even share code with vanilla web applications.
-
-**`observablehq.config.ts`** - This is the [project configuration](https://observablehq.com/framework/config) file, such as the pages and sections in the sidebar navigation, and the project’s title.
-
-## Command reference
-
-| Command           | Description                                              |
-| ----------------- | -------------------------------------------------------- |
-| `npm install`            | Install or reinstall dependencies                        |
-| `npm run dev`        | Start local preview server                               |
-| `npm run build`      | Build your static site, generating `./dist`              |
-| `npm run deploy`     | Deploy your project to Observable                        |
-| `npm run clean`      | Clear the local data loader cache                        |
-| `npm run observable` | Run commands like `observable help`                      |
+![](images/intro.png)
+![](images/guide.png)
+![](images/rna.png)
+![](images/fasta_histogram)
+![](images/translation.png)
diff --git a/observablehq.config.ts b/observablehq.config.ts
index 6fad966..67d99d4 100644
--- a/observablehq.config.ts
+++ b/observablehq.config.ts
@@ -3,6 +3,7 @@ export default {
   // The project’s title; used in the sidebar and webpage titles.
   title: "bioinformatics-toolkit",
   search: true,
+  root: "docs",
   // The pages and sections in the sidebar. If you don’t specify this option,
   // all pages will be listed in alphabetical order. Listing pages explicitly
   // lets you organize them into sections and have unlisted pages.
@@ -10,39 +11,35 @@ export default {
     {
       name: "Fasta Utiliies",
       pages: [
-        {name: "Simple", path: "fastx/fasta_simple"},
-        {name: "FQ->Fasta", path: "fastx/fastq_to_fasta"},
-        {name: "Fastx Stats", path: "fastx/fastx_stats"},
-      ]
+        { name: "Simple", path: "fastx/fasta_simple" },
+        { name: "FQ->Fasta", path: "fastx/fastq_to_fasta" },
+        { name: "Fastx Stats", path: "fastx/fastx_stats" },
+      ],
     },
     {
       name: "DNA Utiliies",
       pages: [
-        {name: "RE_Analysis", path: "dna/restriction_enzyme_analysis"},
-        {name: "Translation", path: "dna/translation"},
-      ]
+        { name: "RE_Analysis", path: "dna/restriction_enzyme_analysis" },
+        { name: "Translation", path: "dna/translation" },
+      ],
     },
     {
       name: "RNA Utiliies",
-      pages: [
-        {name: "RNAnapkin", path: "rna/rna_rnapkin_viz"},
-      ]
+      pages: [{ name: "RNAnapkin", path: "rna/rna_rnapkin_viz" }],
     },
     {
       name: "Javascript Utiliies",
       pages: [
-        {name: "IGVJS", path: "JSApps/igvjs"},
+        { name: "IGVJS", path: "JSApps/igvjs" },
         // {name: "Gosling", path: "JSApps/gosling"},
-        {name: "graphgenomeviewer", path: "JSApps/genomegraph"},
-        {name: "msaviewer", path: "JSApps/msa-viewer"},
-        {name: "ribbon", path: "JSApps/ribbon"},
-        {name: "ideogram", path: "JSApps/ideogram"},
-
-      ]
+        { name: "graphgenomeviewer", path: "JSApps/genomegraph" },
+        { name: "msaviewer", path: "JSApps/msa-viewer" },
+        { name: "ribbon", path: "JSApps/ribbon" },
+        { name: "ideogram", path: "JSApps/ideogram" },
+      ],
     },
   ],
 
-
   // Some additional configuration options and their defaults:
   theme: "default", // try "light", "dark", "slate", etc.
   // header: "", // what to show in the header (HTML)
diff --git a/package.json b/package.json
index 0b5f569..b48e08d 100644
--- a/package.json
+++ b/package.json
@@ -12,21 +12,21 @@
   "dependencies": {
     "@observablehq/framework": "latest",
     "@tauri-apps/api": "^2.0.0-beta.13",
-    "@tauri-apps/plugin-dialog": "^2.0.0-beta.2",
-    "@tauri-apps/plugin-shell": "^2.0.0-beta.2",
+    "@tauri-apps/plugin-dialog": "^2.0.0-beta.7",
+    "@tauri-apps/plugin-shell": "^2.0.0-beta.8",
     "d3-dsv": "^3.0.1",
     "d3-time-format": "^4.1.0",
     "gosling.js": "^0.17.0",
     "higlass": "^1.13.4",
     "ideogram": "^1.45.1",
-    "igv": "2.15.12",
-    "react": "^18.2.0",
-    "react-dom": "^18.2.0"
+    "igv": "2.15.13",
+    "react": "^18.3.1",
+    "react-dom": "^18.3.1"
   },
   "devDependencies": {
     "@tauri-apps/cli": "^2.0.0-beta.10",
-    "typescript": "^5.0.2",
-    "vite": "^5.0.0"
+    "typescript": "^5.5.3",
+    "vite": "^5.3.4"
   },
   "engines": {
     "node": ">=20.6"
diff --git a/src-tauri/Cargo.lock b/src-tauri/Cargo.lock
index b994527..0ed0ecf 100644
--- a/src-tauri/Cargo.lock
+++ b/src-tauri/Cargo.lock
@@ -142,9 +142,9 @@ dependencies = [
 
 [[package]]
 name = "arrayref"
-version = "0.3.7"
+version = "0.3.8"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6b4930d2cb77ce62f89ee5d5289b4ac049559b1c45539271f5ed4fdc7db34545"
+checksum = "9d151e35f61089500b617991b791fc8bfd237ae50cd5950803758a179b41e67a"
 
 [[package]]
 name = "arrayvec"
@@ -416,9 +416,9 @@ dependencies = [
 
 [[package]]
 name = "async-compression"
-version = "0.4.11"
+version = "0.4.12"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cd066d0b4ef8ecb03a55319dc13aa6910616d0f44008a045bb1835af830abff5"
+checksum = "fec134f64e2bc57411226dfc4e52dec859ddfc7e711fc5e07b612584f000e4aa"
 dependencies = [
  "bzip2",
  "flate2",
@@ -490,14 +490,14 @@ checksum = "3b43422f69d8ff38f95f1b2bb76517c91589a924d1559a0e935d7c8ce0274c11"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
 name = "async-signal"
-version = "0.2.8"
+version = "0.2.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "794f185324c2f00e771cd9f1ae8b5ac68be2ca7abb129a87afd6e86d228bc54d"
+checksum = "dfb3634b73397aa844481f814fad23bbf07fdb0eabec10f2eb95e58944b1ec32"
 dependencies = [
  "async-io",
  "async-lock",
@@ -525,7 +525,7 @@ checksum = "6e0c28dcc82d7c8ead5cb13beb15405b57b8546e93215673ff8ca0349a028107"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -665,9 +665,9 @@ dependencies = [
 
 [[package]]
 name = "aws-sdk-sso"
-version = "1.34.0"
+version = "1.35.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cdcfae7bf8b8f14cade7579ffa8956fcee91dc23633671096b4b5de7d16f682a"
+checksum = "fc3ef4ee9cdd19ec6e8b10d963b79637844bbf41c31177b77a188eaa941e69f7"
 dependencies = [
  "aws-credential-types",
  "aws-runtime",
@@ -687,9 +687,9 @@ dependencies = [
 
 [[package]]
 name = "aws-sdk-ssooidc"
-version = "1.35.0"
+version = "1.36.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "33b30def8f02ba81276d5dbc22e7bf3bed20d62d1b175eef82680d6bdc7a6f4c"
+checksum = "527f3da450ea1f09f95155dba6153bd0d83fe0923344a12e1944dfa5d0b32064"
 dependencies = [
  "aws-credential-types",
  "aws-runtime",
@@ -709,9 +709,9 @@ dependencies = [
 
 [[package]]
 name = "aws-sdk-sts"
-version = "1.34.0"
+version = "1.35.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0804f840ad31537d5d1a4ec48d59de5e674ad05f1db7d3def2c9acadaf1f7e60"
+checksum = "94316606a4aa2cb7a302388411b8776b3fbd254e8506e2dc43918286d8212e9b"
 dependencies = [
  "aws-credential-types",
  "aws-runtime",
@@ -818,7 +818,7 @@ dependencies = [
  "h2 0.3.26",
  "http 0.2.12",
  "http-body 0.4.6",
- "http-body 1.0.0",
+ "http-body 1.0.1",
  "httparse",
  "hyper 0.14.30",
  "hyper-rustls 0.24.2",
@@ -859,7 +859,7 @@ dependencies = [
  "http 0.2.12",
  "http 1.1.0",
  "http-body 0.4.6",
- "http-body 1.0.0",
+ "http-body 1.0.1",
  "http-body-util",
  "itoa 1.0.11",
  "num-integer",
@@ -932,9 +932,9 @@ dependencies = [
 
 [[package]]
 name = "bigtools"
-version = "0.4.3"
+version = "0.5.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3991a416f05e8b4b5dc3c21bf86840217cd2fe2f995673d82698803d8e229c61"
+checksum = "94a336849e5d6aa4590c7fb38ef17d388a4c7ccd7b1e4c399419f10d1d185459"
 dependencies = [
  "attohttpc",
  "bincode",
@@ -998,7 +998,7 @@ dependencies = [
  "serde_derive",
  "statrs",
  "strum 0.25.0",
- "strum_macros 0.26.4",
+ "strum_macros",
  "thiserror",
  "triple_accel",
  "vec_map",
@@ -1006,14 +1006,14 @@ dependencies = [
 
 [[package]]
 name = "bio-types"
-version = "1.0.1"
+version = "1.0.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9d45749b87f21808051025e9bf714d14ff4627f9d8ca967eade6946ea769aa4a"
+checksum = "1cc7edd677651969cc262a8dfb870f0c2266c3ceeaf863d742982e39699ff460"
 dependencies = [
  "derive-new",
  "lazy_static",
  "regex",
- "strum_macros 0.25.3",
+ "strum_macros",
  "thiserror",
 ]
 
@@ -1023,9 +1023,7 @@ version = "0.0.3"
 dependencies = [
  "bio",
  "exon",
- "filepath",
- "filesize",
- "noodles-fasta",
+ "noodles-fasta 0.40.0",
  "noodles-fastq",
  "protein-translate",
  "rnapkin",
@@ -1044,7 +1042,7 @@ version = "0.5.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "0700ddab506f33b20a03b13996eccd309a48e5ff77d0d95926aa0210fb4e95f1"
 dependencies = [
- "bit-vec",
+ "bit-vec 0.6.3",
 ]
 
 [[package]]
@@ -1053,6 +1051,12 @@ version = "0.6.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "349f9b6a179ed607305526ca489b34ad0a41aed5f7980fa90eb03160b69598fb"
 
+[[package]]
+name = "bit-vec"
+version = "0.7.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "d2c54ff287cfc0a34f38a6b832ea1bd8e448a330b3e40a50859e6488bee07f22"
+
 [[package]]
 name = "bitflags"
 version = "1.3.2"
@@ -1079,9 +1083,9 @@ dependencies = [
 
 [[package]]
 name = "blake3"
-version = "1.5.1"
+version = "1.5.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "30cca6d3674597c30ddf2c587bf8d9d65c9a84d2326d941cc79c9842dfe0ef52"
+checksum = "e9ec96fe9a81b5e365f9db71fe00edc4fe4ca2cc7dcb7861f0603012a7caa210"
 dependencies = [
  "arrayref",
  "arrayvec",
@@ -1224,9 +1228,9 @@ dependencies = [
 
 [[package]]
 name = "bytes"
-version = "1.6.0"
+version = "1.6.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "514de17de45fdb8dc022b1a7975556c53c86f9f0aa5f534b98977b171857c2c9"
+checksum = "a12916984aab3fa6e39d655a33e09c0071eb36d6ab3aea5c2d78551f1df6d952"
 dependencies = [
  "serde",
 ]
@@ -1331,13 +1335,12 @@ dependencies = [
 
 [[package]]
 name = "cc"
-version = "1.1.0"
+version = "1.1.6"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "eaff6f8ce506b9773fa786672d63fc7a191ffea1be33f72bbd4aeacefca9ffc8"
+checksum = "2aba8f4e9906c7ce3c73463f62a7f0c65183ada1a2d47e397cc8810827f9694f"
 dependencies = [
  "jobserver",
  "libc",
- "once_cell",
 ]
 
 [[package]]
@@ -1453,7 +1456,7 @@ dependencies = [
  "heck 0.5.0",
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -1527,7 +1530,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "b34115915337defe99b2aff5c2ce6771e5fbc4079f4b506301f5cf394c8452f7"
 dependencies = [
  "strum 0.26.3",
- "strum_macros 0.26.4",
+ "strum_macros",
  "unicode-width",
 ]
 
@@ -1697,7 +1700,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "13b588ba4ac1a99f7f2964d24b3d896ddc6bf847ee3855dbd4366f058cfcd331"
 dependencies = [
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -1738,7 +1741,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "edb49164822f3ee45b17acd4a208cfc1251410cf0cad9a833234c9890774dd9f"
 dependencies = [
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -1768,7 +1771,7 @@ dependencies = [
  "proc-macro2",
  "quote",
  "strsim",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -1779,7 +1782,7 @@ checksum = "d336a2a514f6ccccaa3e09b02d41d35330c07ddf03a62165fcec10bb561c7806"
 dependencies = [
  "darling_core",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -1797,9 +1800,9 @@ dependencies = [
 
 [[package]]
 name = "datafusion"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "2f92d2d7a9cba4580900b32b009848d9eb35f1028ac84cdd6ddcf97612cd0068"
+checksum = "ab9d55a9cd2634818953809f75ebe5248b00dd43c3227efb2a51a2d5feaad54e"
 dependencies = [
  "ahash",
  "arrow",
@@ -1851,9 +1854,9 @@ dependencies = [
 
 [[package]]
 name = "datafusion-common"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "effed030d2c1667eb1e11df5372d4981eaf5d11a521be32220b3985ae5ba6971"
+checksum = "def66b642959e7f96f5d2da22e1f43d3bd35598f821e5ce351a0553e0f1b7367"
 dependencies = [
  "ahash",
  "arrow",
@@ -1873,18 +1876,18 @@ dependencies = [
 
 [[package]]
 name = "datafusion-common-runtime"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d0091318129dad1359f08e4c6c71f855163c35bba05d1dbf983196f727857894"
+checksum = "f104bb9cb44c06c9badf8a0d7e0855e5f7fa5e395b887d7f835e8a9457dc1352"
 dependencies = [
  "tokio",
 ]
 
 [[package]]
 name = "datafusion-execution"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8385aba84fc4a06d3ebccfbcbf9b4f985e80c762fac634b49079f7cc14933fb1"
+checksum = "2ac0fd8b5d80bbca3fc3b6f40da4e9f6907354824ec3b18bbd83fee8cf5c3c3e"
 dependencies = [
  "arrow",
  "chrono",
@@ -1903,9 +1906,9 @@ dependencies = [
 
 [[package]]
 name = "datafusion-expr"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ebb192f0055d2ce64e38ac100abc18e4e6ae9734d3c28eee522bbbd6a32108a3"
+checksum = "2103d2cc16fb11ef1fa993a6cac57ed5cb028601db4b97566c90e5fa77aa1e68"
 dependencies = [
  "ahash",
  "arrow",
@@ -1917,14 +1920,14 @@ dependencies = [
  "serde_json",
  "sqlparser",
  "strum 0.26.3",
- "strum_macros 0.26.4",
+ "strum_macros",
 ]
 
 [[package]]
 name = "datafusion-functions"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "27c081ae5b7edd712b92767fb8ed5c0e32755682f8075707666cd70835807c0b"
+checksum = "a369332afd0ef5bd565f6db2139fb9f1dfdd0afa75a7f70f000b74208d76994f"
 dependencies = [
  "arrow",
  "base64 0.22.1",
@@ -1934,7 +1937,6 @@ dependencies = [
  "datafusion-common",
  "datafusion-execution",
  "datafusion-expr",
- "datafusion-physical-expr",
  "hashbrown 0.14.5",
  "hex",
  "itertools 0.12.1",
@@ -1949,9 +1951,9 @@ dependencies = [
 
 [[package]]
 name = "datafusion-functions-aggregate"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "feb28a4ea52c28a26990646986a27c4052829a2a2572386258679e19263f8b78"
+checksum = "92718db1aff70c47e5abf9fc975768530097059e5db7c7b78cd64b5e9a11fc77"
 dependencies = [
  "ahash",
  "arrow",
@@ -1967,9 +1969,9 @@ dependencies = [
 
 [[package]]
 name = "datafusion-functions-array"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "89b17c02a74cdc87380a56758ec27e7d417356bf806f33062700908929aedb8a"
+checksum = "30bb80f46ff3dcf4bb4510209c2ba9b8ce1b716ac8b7bf70c6bf7dca6260c831"
 dependencies = [
  "arrow",
  "arrow-array",
@@ -1980,6 +1982,7 @@ dependencies = [
  "datafusion-execution",
  "datafusion-expr",
  "datafusion-functions",
+ "datafusion-functions-aggregate",
  "itertools 0.12.1",
  "log",
  "paste",
@@ -1987,9 +1990,9 @@ dependencies = [
 
 [[package]]
 name = "datafusion-optimizer"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "12172f2a6c9eb4992a51e62d709eeba5dedaa3b5369cce37ff6c2260e100ba76"
+checksum = "82f34692011bec4fdd6fc18c264bf8037b8625d801e6dd8f5111af15cb6d71d3"
 dependencies = [
  "arrow",
  "async-trait",
@@ -2001,14 +2004,15 @@ dependencies = [
  "indexmap 2.2.6",
  "itertools 0.12.1",
  "log",
+ "paste",
  "regex-syntax 0.8.4",
 ]
 
 [[package]]
 name = "datafusion-physical-expr"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7a3fce531b623e94180f6cd33d620ef01530405751b6ddd2fd96250cdbd78e2e"
+checksum = "45538630defedb553771434a437f7ca8f04b9b3e834344aafacecb27dc65d5e5"
 dependencies = [
  "ahash",
  "arrow",
@@ -2022,7 +2026,6 @@ dependencies = [
  "datafusion-common",
  "datafusion-execution",
  "datafusion-expr",
- "datafusion-functions-aggregate",
  "datafusion-physical-expr-common",
  "half",
  "hashbrown 0.14.5",
@@ -2037,21 +2040,23 @@ dependencies = [
 
 [[package]]
 name = "datafusion-physical-expr-common"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "046400b6a2cc3ed57a7c576f5ae6aecc77804ac8e0186926b278b189305b2a77"
+checksum = "9d8a72b0ca908e074aaeca52c14ddf5c28d22361e9cb6bc79bb733cd6661b536"
 dependencies = [
+ "ahash",
  "arrow",
  "datafusion-common",
  "datafusion-expr",
+ "hashbrown 0.14.5",
  "rand 0.8.5",
 ]
 
 [[package]]
 name = "datafusion-physical-plan"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4aed47f5a2ad8766260befb375b201592e86a08b260256e168ae4311426a2bff"
+checksum = "b504eae6107a342775e22e323e9103f7f42db593ec6103b28605b7b7b1405c4a"
 dependencies = [
  "ahash",
  "arrow",
@@ -2083,9 +2088,9 @@ dependencies = [
 
 [[package]]
 name = "datafusion-sql"
-version = "39.0.0"
+version = "40.0.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "7fa92bb1fd15e46ce5fb6f1c85f3ac054592560f294429a28e392b5f9cd4255e"
+checksum = "e5db33f323f41b95ae201318ba654a9bf11113e58a51a1dff977b1a836d3d889"
 dependencies = [
  "arrow",
  "arrow-array",
@@ -2121,13 +2126,13 @@ dependencies = [
 
 [[package]]
 name = "derive-new"
-version = "0.5.9"
+version = "0.6.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3418329ca0ad70234b9735dc4ceed10af4df60eff9c8e7b06cb5e520d92c3535"
+checksum = "d150dea618e920167e5973d70ae6ece4385b7164e0d799fe7c122dd0a5d912ad"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 1.0.109",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -2140,7 +2145,7 @@ dependencies = [
  "proc-macro2",
  "quote",
  "rustc_version 0.4.0",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -2208,7 +2213,7 @@ version = "0.5.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "330c60081dcc4c72131f8eb70510f1ac07223e5d4163db481a04a0befcffa412"
 dependencies = [
- "libloading 0.8.4",
+ "libloading 0.8.5",
 ]
 
 [[package]]
@@ -2231,7 +2236,7 @@ checksum = "f2b99bf03862d7f545ebc28ddd33a665b50865f4dfd84031a393823879bd4c54"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -2302,9 +2307,9 @@ checksum = "60b1af1c220855b6ceac025d3f6ecdd2b7c4894bfe9cd9bda4fbb4bc7c0d4cf0"
 
 [[package]]
 name = "embed-resource"
-version = "2.4.2"
+version = "2.4.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c6985554d0688b687c5cb73898a34fbe3ad6c24c58c238a4d91d5e840670ee9d"
+checksum = "4edcacde9351c33139a41e3c97eb2334351a81a2791bebb0b243df837128f602"
 dependencies = [
  "cc",
  "memchr",
@@ -2352,7 +2357,7 @@ checksum = "f282cfdfe92516eb26c2af8589c274c7c17681f5ecc03c18255fe741c6aa64eb"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -2373,7 +2378,7 @@ checksum = "de0d48a183585823424a4ce1aa132d174a6a81bd540895822eb4c8373a8e49e8"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -2439,9 +2444,9 @@ dependencies = [
 
 [[package]]
 name = "exon"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "5ceb4a4a4325bc8940ec5c634a08aa084b282b73ef0df2dcdec71d8d1ba43c6f"
+checksum = "fb9b16f9b37e1271b0f4733b58bcdee5773f21bfff38f02950b365c70e171f9f"
 dependencies = [
  "arrow",
  "async-trait",
@@ -2463,6 +2468,7 @@ dependencies = [
  "exon-io",
  "exon-mzml",
  "exon-sam",
+ "exon-sdf",
  "exon-vcf",
  "futures",
  "fxhash",
@@ -2483,9 +2489,9 @@ dependencies = [
 
 [[package]]
 name = "exon-bam"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "151de618af928f9abad3daf215bb937839eb6aa2c53f388c970d7b22bd32b838"
+checksum = "4b5f4474ba2f27548650d27a8f3dfd169d79b637fa6e086de154c60b4789102d"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2499,9 +2505,9 @@ dependencies = [
 
 [[package]]
 name = "exon-bcf"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "0d5a4f472462cd2ce8efdd2bc3f8509622cf03e75980f2806df08b59a22a16c4"
+checksum = "c9e9df738b07012afd06318329a1ce49171ae4401dc0200699cd260ac2dd03fa"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2514,9 +2520,9 @@ dependencies = [
 
 [[package]]
 name = "exon-bed"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "01a3143a32b123b43386cccaa55ea3c2dbffbf17da297bbe1f84425120db9b26"
+checksum = "b48a187df5c798d48012ff5d39a64436fd5b4b965554aa327fed5151e877ec83"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2529,9 +2535,9 @@ dependencies = [
 
 [[package]]
 name = "exon-bigwig"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ab0491c0a5613b97f05f1e2fac27b7b485ae88db07ad479c2f6a9b3b78c7efc9"
+checksum = "a3b52f86fe1ee723611441c58ea08b1f0179088d17da792e7e2c823e47735847"
 dependencies = [
  "arrow",
  "bigtools",
@@ -2545,9 +2551,9 @@ dependencies = [
 
 [[package]]
 name = "exon-common"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c1c5c67970eabb96d0b97d94f71b03133b144102e94ff1cb2893c7840ca7c77f"
+checksum = "c4ca5e0e1e9dedb9a57fa67f563f6acc359c34be8b5a3cde2e1474a07b6c2cdb"
 dependencies = [
  "arrow",
  "datafusion",
@@ -2559,9 +2565,9 @@ dependencies = [
 
 [[package]]
 name = "exon-cram"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "aaf2b4cd7550b93b13166957e9de3ed1c94304e0db769bccb4e8f36ac7ecad29"
+checksum = "c1fa335c9a8568c4eba617c3b4023bc9c45b5174ed0508b21cc69572d548ad4d"
 dependencies = [
  "arrow",
  "coitrees",
@@ -2576,9 +2582,9 @@ dependencies = [
 
 [[package]]
 name = "exon-fasta"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "cb918f654fbb5226a1bd87d9af495c47c85a1a721572fb3a24ad027473504ea4"
+checksum = "c79385b9dc548d6e636d5d352f4893fd31f6884aafd4a221a564998602cdf00e"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2591,9 +2597,9 @@ dependencies = [
 
 [[package]]
 name = "exon-fastq"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "306e51639c01e40ca6d2a72ac46d5d96b13f6b4d2fc47e510ec17ea0fa2b30d9"
+checksum = "6ef6a572257499f2ae22e1e47f3d0fee6d139e7f5359cbbc934f03ac2eb12b57"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2606,9 +2612,9 @@ dependencies = [
 
 [[package]]
 name = "exon-fcs"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "065d6533a8097689e31a9af6410f57b0fb7262c5204909a5f80e93793ad65175"
+checksum = "d27b888875288b995465e3c39368b75933518ed6ec819a59be56f96f3766b56e"
 dependencies = [
  "arrow",
  "byteorder",
@@ -2620,9 +2626,9 @@ dependencies = [
 
 [[package]]
 name = "exon-genbank"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1192ab710c483e1979120577d2c66e4afc454491d8d9ffc7ed89a12f7ca0c5a1"
+checksum = "6d174d6088bd3688e983d8f4746dfa2a8f6efb2f155b874bed01435bb1a39df5"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2634,9 +2640,9 @@ dependencies = [
 
 [[package]]
 name = "exon-gff"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "a28d7af804e1a82c2b532a91b9601474c445f4b599b11196d03678090478e5d1"
+checksum = "4a5fc45c7586dffc5f8e0e2d4d2128ee883112a0ce1c4a8ed2a8430126abe1ed"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2649,9 +2655,9 @@ dependencies = [
 
 [[package]]
 name = "exon-gtf"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4546adebc3b9f35cbaa82d4479c7362332b62fd97d225c9a3bc08db89f03508d"
+checksum = "acd53afdd49f048875f0be22c94686f5bd9cd2ad5bdd116ff932ac62285f2824"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2663,9 +2669,9 @@ dependencies = [
 
 [[package]]
 name = "exon-io"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "72450a689a3d7ecaf3ce6b2e2c503f627cb08a1382c253cf85fc3856f516a833"
+checksum = "3f8de982cf32bbd1af85cdd218d4dda3ca889814f7d0e5756d42919f6f064108"
 dependencies = [
  "async-trait",
  "aws-config",
@@ -2677,9 +2683,9 @@ dependencies = [
 
 [[package]]
 name = "exon-mzml"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "9e2f5bbfc7b8aa3e70f7e85c5ccb2601d6777ba0288a78f02d01f6ae82cfeb2e"
+checksum = "9d37defc83a28d685ccb8f21194ff2a8bf387698de171e5c6b89eca6463f5954"
 dependencies = [
  "arrow",
  "base64 0.22.1",
@@ -2688,16 +2694,16 @@ dependencies = [
  "flate2",
  "futures",
  "object_store",
- "quick-xml 0.31.0",
+ "quick-xml 0.36.0",
  "serde",
  "tokio",
 ]
 
 [[package]]
 name = "exon-sam"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "013d71fb0b051d039b15f74157bb7f5cc06e50f9da8d1c35263b82e57ab4b2ba"
+checksum = "92113df1d3d4c0c831834ad535e4c1a0ba462d598838cc74f41698555df152f5"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2708,11 +2714,27 @@ dependencies = [
  "tokio",
 ]
 
+[[package]]
+name = "exon-sdf"
+version = "0.29.1"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "132ca09685843f7456623336da6a0edddd72da357f284e08bca0e10be9fa6baa"
+dependencies = [
+ "arrow",
+ "exon-common",
+ "futures",
+ "object_store",
+ "regex",
+ "tokio",
+ "tracing",
+ "tracing-subscriber",
+]
+
 [[package]]
 name = "exon-vcf"
-version = "0.26.1"
+version = "0.29.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "90e76a2523ea4ca737b0e81fbffe4d2140b0c3c4bf7dd6e378a0b61b3cf63756"
+checksum = "9bc3c3bdb1c9491f2d18fc9a7b7d4ee0379ff03c9edc20dd315bf73c3ef4fece"
 dependencies = [
  "arrow",
  "exon-common",
@@ -2753,25 +2775,6 @@ dependencies = [
  "rustc_version 0.4.0",
 ]
 
-[[package]]
-name = "filepath"
-version = "0.1.2"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "f7faa16fcec147281a1719947edb44af4f9124964bf7476bd5f5356a48e44dcc"
-dependencies = [
- "libc",
- "winapi",
-]
-
-[[package]]
-name = "filesize"
-version = "0.2.0"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "12d741e2415d4e2e5bd1c1d00409d1a8865a57892c2d689b504365655d237d43"
-dependencies = [
- "winapi",
-]
-
 [[package]]
 name = "fixedbitset"
 version = "0.4.2"
@@ -2853,7 +2856,7 @@ checksum = "1a5c6c585bc94aaf2c7b51dd4c2ba22680844aba4c687be581871a6f518c5742"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -2962,7 +2965,7 @@ checksum = "87750cf4b7a4c0625b1529e4c543c2182106e4dedc60a2a6455e00d212c489ac"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -3247,7 +3250,7 @@ dependencies = [
  "proc-macro-error",
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -3326,7 +3329,7 @@ dependencies = [
  "proc-macro-error",
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -3491,9 +3494,9 @@ dependencies = [
 
 [[package]]
 name = "http-body"
-version = "1.0.0"
+version = "1.0.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1cac85db508abc24a2e48553ba12a996e87244a0395ce011e62b37158745d643"
+checksum = "1efedce1fb8e6913f23e0c92de8e62cd5b772a67e7b3946df930a62566c93184"
 dependencies = [
  "bytes",
  "http 1.1.0",
@@ -3508,7 +3511,7 @@ dependencies = [
  "bytes",
  "futures-util",
  "http 1.1.0",
- "http-body 1.0.0",
+ "http-body 1.0.1",
  "pin-project-lite",
 ]
 
@@ -3565,7 +3568,7 @@ dependencies = [
  "futures-util",
  "h2 0.4.5",
  "http 1.1.0",
- "http-body 1.0.0",
+ "http-body 1.0.1",
  "httparse",
  "itoa 1.0.11",
  "pin-project-lite",
@@ -3618,7 +3621,7 @@ dependencies = [
  "futures-channel",
  "futures-util",
  "http 1.1.0",
- "http-body 1.0.0",
+ "http-body 1.0.1",
  "hyper 1.4.1",
  "pin-project-lite",
  "socket2",
@@ -4053,9 +4056,9 @@ dependencies = [
 
 [[package]]
 name = "libloading"
-version = "0.8.4"
+version = "0.8.5"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e310b3a6b5907f99202fcdb4960ff45b93735d7c7d96b760fcff8db2dc0e103d"
+checksum = "4979f22fdb869068da03c9f7528f8297c6fd2606bc3a4affe42e6a823fdb8da4"
 dependencies = [
  "cfg-if",
  "windows-targets 0.52.6",
@@ -4384,18 +4387,18 @@ dependencies = [
 
 [[package]]
 name = "noodles"
-version = "0.77.0"
+version = "0.78.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "6f8629ce12eeb2d6483be18af64beb9488840299ecd617be4ec2f4ebf66688e6"
+checksum = "81e0702ff73390d2b8f97751bc34cfedcd3f5d39b4e32875e4c64a32d8cc670b"
 dependencies = [
  "noodles-bam",
  "noodles-bcf",
  "noodles-bed",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-cram",
  "noodles-csi",
- "noodles-fasta",
+ "noodles-fasta 0.41.0",
  "noodles-fastq",
  "noodles-gff",
  "noodles-gtf",
@@ -4406,17 +4409,17 @@ dependencies = [
 
 [[package]]
 name = "noodles-bam"
-version = "0.64.0"
+version = "0.65.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3fd4e9825cce4ed3c7fa958efce37268d899bdb7fdeb22d73493a095de1564be"
+checksum = "406d4768f21c73e3075c0c0d77a5b21bc8b8169c8f0963122607cc410427b727"
 dependencies = [
- "bit-vec",
+ "bit-vec 0.7.0",
  "bstr",
  "byteorder",
  "bytes",
  "futures",
  "indexmap 2.2.6",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-csi",
  "noodles-sam",
@@ -4425,14 +4428,14 @@ dependencies = [
 
 [[package]]
 name = "noodles-bcf"
-version = "0.57.0"
+version = "0.58.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "303f875dac987f76fcf05e133811e3ccc25c8649151569e7c8003f25d78b7aa8"
+checksum = "f1f217d811dde790866d3c4902ef713f9dc5c4b96e51935571ddf68399f97ad6"
 dependencies = [
  "byteorder",
  "futures",
  "indexmap 2.2.6",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-csi",
  "noodles-vcf",
@@ -4453,6 +4456,18 @@ name = "noodles-bgzf"
 version = "0.31.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "754f4d28655c5d486e2a62814c5dcc46ad2cee5a2b6cbe91fd765a5ec997f91a"
+dependencies = [
+ "byteorder",
+ "bytes",
+ "crossbeam-channel",
+ "flate2",
+]
+
+[[package]]
+name = "noodles-bgzf"
+version = "0.32.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "2b2fba0f4a64cc897d9396d730a0c444d148daed7de31ad5904ecc673178fc9d"
 dependencies = [
  "byteorder",
  "bytes",
@@ -4475,9 +4490,9 @@ dependencies = [
 
 [[package]]
 name = "noodles-cram"
-version = "0.65.0"
+version = "0.66.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "4cf95f7e286f62550121f6135a1cb372a0233eba7bffb7f7bebe55eb4f12b35c"
+checksum = "8c7f58d900eb9fa1f0ef1a4834a6f71bfa792b25b2fa3b02e582239089907909"
 dependencies = [
  "async-compression",
  "bitflags 2.6.0",
@@ -4491,7 +4506,7 @@ dependencies = [
  "md-5",
  "noodles-bam",
  "noodles-core",
- "noodles-fasta",
+ "noodles-fasta 0.41.0",
  "noodles-sam",
  "pin-project-lite",
  "tokio",
@@ -4500,14 +4515,14 @@ dependencies = [
 
 [[package]]
 name = "noodles-csi"
-version = "0.36.0"
+version = "0.37.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "89ac24bac459ae99c046086d771f5a79f632ab27a9280406f2fbb7a3238d79cc"
+checksum = "e4bc8001c54f1d8e47e1ac6041a5f27edc99b68bacea3fade9c89059de285aea"
 dependencies = [
- "bit-vec",
+ "bit-vec 0.7.0",
  "byteorder",
  "indexmap 2.2.6",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "tokio",
 ]
@@ -4521,16 +4536,29 @@ dependencies = [
  "bstr",
  "bytes",
  "memchr",
- "noodles-bgzf",
+ "noodles-bgzf 0.31.0",
+ "noodles-core",
+]
+
+[[package]]
+name = "noodles-fasta"
+version = "0.41.0"
+source = "registry+https://github.com/rust-lang/crates.io-index"
+checksum = "d7a1662ac3ace299515c982a322e378bbeb4c1bd90fb098d823ef0f3a6abcc00"
+dependencies = [
+ "bstr",
+ "bytes",
+ "memchr",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "tokio",
 ]
 
 [[package]]
 name = "noodles-fastq"
-version = "0.12.0"
+version = "0.13.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "07822ab5042903a710fedc1ac86e08c18dfc1bd87af404e938efa3df212c1011"
+checksum = "c1edf1f924acddeee36304c444e242b9bda52ef9383dc2d7f008fca190753207"
 dependencies = [
  "futures",
  "memchr",
@@ -4539,13 +4567,13 @@ dependencies = [
 
 [[package]]
 name = "noodles-gff"
-version = "0.34.0"
+version = "0.35.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1461ade66be950a9c4ad10839f960a50b41c4174471ff904350d203e57a052b1"
+checksum = "adef59012090b5694b58cad0e4426cd18af404803f942d02e664af607d89ee28"
 dependencies = [
  "futures",
  "indexmap 2.2.6",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-csi",
  "percent-encoding",
@@ -4554,20 +4582,20 @@ dependencies = [
 
 [[package]]
 name = "noodles-gtf"
-version = "0.29.0"
+version = "0.30.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d3935823a534a1bd1fb65d033adce6bf0dbb78fdd0df085d7fc71ebc6a2377fa"
+checksum = "7fd29a4d1bb243412ebd5090d0908c0c797ad3dd7832cc1623175c9c7c9d1a5a"
 dependencies = [
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-csi",
 ]
 
 [[package]]
 name = "noodles-sam"
-version = "0.61.0"
+version = "0.62.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "48e2636562b1b13e21369e82b0426cd532a3fb2dc676eccec89215a1a8dad243"
+checksum = "b80efc627501962e2ff15411d1c011fa9cf3db1b47ddd13dceb1d1134068d5b7"
 dependencies = [
  "bitflags 2.6.0",
  "bstr",
@@ -4575,7 +4603,7 @@ dependencies = [
  "indexmap 2.2.6",
  "lexical-core",
  "memchr",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-csi",
  "tokio",
@@ -4583,14 +4611,14 @@ dependencies = [
 
 [[package]]
 name = "noodles-tabix"
-version = "0.42.0"
+version = "0.43.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8ddf20eb2a380e00bbe6ec3105f1ef5c62307381f4bcf4175b31d582d43a7e59"
+checksum = "545e16e229b7f8734b0a2a36bd4c98a5b70128663b16b5201ddadc0d09c28d4a"
 dependencies = [
- "bit-vec",
+ "bit-vec 0.7.0",
  "byteorder",
  "indexmap 2.2.6",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-csi",
  "tokio",
@@ -4598,14 +4626,14 @@ dependencies = [
 
 [[package]]
 name = "noodles-vcf"
-version = "0.60.0"
+version = "0.61.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "adb37ce398cc0132b5855ac720c2e9efe14270b38be57ee576d79bc918754e2a"
+checksum = "b6372f1df57c1826d083370b6eac586f331509feed15fd80dda306ef3e7ac68d"
 dependencies = [
  "futures",
  "indexmap 2.2.6",
  "memchr",
- "noodles-bgzf",
+ "noodles-bgzf 0.32.0",
  "noodles-core",
  "noodles-csi",
  "noodles-tabix",
@@ -4885,9 +4913,9 @@ dependencies = [
 
 [[package]]
 name = "object_store"
-version = "0.10.1"
+version = "0.10.2"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "fbebfd32c213ba1907fa7a9c9138015a8de2b43e30c5aa45b18f7deb46786ad6"
+checksum = "e6da452820c715ce78221e8202ccc599b4a52f3e1eb3eedb487b680c81a8e3f3"
 dependencies = [
  "async-trait",
  "base64 0.22.1",
@@ -4896,11 +4924,11 @@ dependencies = [
  "futures",
  "humantime",
  "hyper 1.4.1",
- "itertools 0.12.1",
+ "itertools 0.13.0",
  "md-5",
  "parking_lot",
  "percent-encoding",
- "quick-xml 0.31.0",
+ "quick-xml 0.36.0",
  "rand 0.8.5",
  "reqwest",
  "ring",
@@ -5252,7 +5280,7 @@ dependencies = [
  "phf_shared 0.11.2",
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -5299,7 +5327,7 @@ checksum = "2f38a4412a78282e09a2cf38d195ea5420d15ba0602cb375210efbc877243965"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -5503,22 +5531,22 @@ checksum = "afa70b854979006e13b65c68f17beb74d9b7505e22a584b4418dc360f55a0f88"
 
 [[package]]
 name = "quick-xml"
-version = "0.31.0"
+version = "0.32.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1004a344b30a54e2ee58d66a71b32d2db2feb0a31f9a2d302bf0536f15de2a33"
+checksum = "1d3a6e5838b60e0e8fa7a43f22ade549a37d61f8bdbe636d0d7816191de969c2"
 dependencies = [
  "memchr",
- "serde",
- "tokio",
 ]
 
 [[package]]
 name = "quick-xml"
-version = "0.32.0"
+version = "0.36.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1d3a6e5838b60e0e8fa7a43f22ade549a37d61f8bdbe636d0d7816191de969c2"
+checksum = "4091e032efecb09d7b1f711f487b85ab925632a842627e3200fb088382cde32c"
 dependencies = [
  "memchr",
+ "serde",
+ "tokio",
 ]
 
 [[package]]
@@ -5688,9 +5716,9 @@ checksum = "60a357793950651c4ed0f3f52338f53b2f809f32d83a07f72909fa13e4c6c1e3"
 
 [[package]]
 name = "redox_syscall"
-version = "0.5.2"
+version = "0.5.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c82cf8cff14456045f55ec4241383baeff27af886adb72ffb2162f99911de0fd"
+checksum = "2a908a6e00f1fdd0dfd9c0eb08ce85126f6d8bbda50017e74bc4a4b7d4a926a4"
 dependencies = [
  "bitflags 2.6.0",
 ]
@@ -5768,7 +5796,7 @@ dependencies = [
  "futures-util",
  "h2 0.4.5",
  "http 1.1.0",
- "http-body 1.0.0",
+ "http-body 1.0.1",
  "http-body-util",
  "hyper 1.4.1",
  "hyper-rustls 0.27.2",
@@ -6054,7 +6082,7 @@ dependencies = [
  "proc-macro2",
  "quote",
  "serde_derive_internals",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -6081,9 +6109,9 @@ dependencies = [
 
 [[package]]
 name = "security-framework"
-version = "2.11.0"
+version = "2.11.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c627723fd09706bacdb5cf41499e95098555af3c3c29d014dc3c458ef6be11c0"
+checksum = "897b2245f0b511c87893af39b033e5ca9cce68824c4d7e7630b5a1d339658d02"
 dependencies = [
  "bitflags 2.6.0",
  "core-foundation",
@@ -6094,9 +6122,9 @@ dependencies = [
 
 [[package]]
 name = "security-framework-sys"
-version = "2.11.0"
+version = "2.11.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "317936bbbd05227752583946b9e66d7ce3b489f84e11a94a510b4437fef407d7"
+checksum = "75da29fe9b9b08fe9d6b22b5b4bcbc75d8db3aa31e639aa56bb62e9d46bfceaf"
 dependencies = [
  "core-foundation-sys",
  "libc",
@@ -6180,7 +6208,7 @@ checksum = "e0cd7e117be63d3c3678776753929474f3b04a43a080c744d6b0ae2a8c28e222"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -6191,7 +6219,7 @@ checksum = "18d26a20a969b9e3fdf2fc2d9f21eda6c40e2de84c9408bb5d3b05d499aae711"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -6213,7 +6241,7 @@ checksum = "6c64451ba24fc7a6a2d60fc75dd9c83c90903b19028d4eff35e88fc1e86564e9"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -6239,9 +6267,9 @@ dependencies = [
 
 [[package]]
 name = "serde_with"
-version = "3.8.3"
+version = "3.9.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e73139bc5ec2d45e6c5fd85be5a46949c1c39a4c18e56915f5eb4c12f975e377"
+checksum = "69cecfa94848272156ea67b2b1a53f20fc7bc638c4a46d2f8abde08f05f4b857"
 dependencies = [
  "base64 0.22.1",
  "chrono",
@@ -6257,14 +6285,14 @@ dependencies = [
 
 [[package]]
 name = "serde_with_macros"
-version = "3.8.3"
+version = "3.9.0"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b80d3d6b56b64335c0180e5ffde23b3c5e08c14c585b51a15bd0e95393f46703"
+checksum = "a8fee4991ef4f274617a51ad4af30519438dacb2f56ac773b08a1922ff743350"
 dependencies = [
  "darling",
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -6500,7 +6528,7 @@ checksum = "01b2e185515564f15375f593fb966b5718bc624ba77fe49fa4616ad619690554"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -6581,20 +6609,7 @@ version = "0.26.3"
 source = "registry+https://github.com/rust-lang/crates.io-index"
 checksum = "8fec0f0aef304996cf250b31b5a10dee7980c85da9d759361292b8bca5a18f06"
 dependencies = [
- "strum_macros 0.26.4",
-]
-
-[[package]]
-name = "strum_macros"
-version = "0.25.3"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "23dc1fa9ac9c169a78ba62f0b841814b7abae11bdd047b9c58f893439e309ea0"
-dependencies = [
- "heck 0.4.1",
- "proc-macro2",
- "quote",
- "rustversion",
- "syn 2.0.70",
+ "strum_macros",
 ]
 
 [[package]]
@@ -6607,7 +6622,7 @@ dependencies = [
  "proc-macro2",
  "quote",
  "rustversion",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -6640,9 +6655,9 @@ dependencies = [
 
 [[package]]
 name = "syn"
-version = "2.0.70"
+version = "2.0.72"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "2f0209b68b3613b093e0ec905354eccaedcfe83b8cb37cbdeae64026c3064c16"
+checksum = "dc4b9b9bf2add8093d3f2c0204471e951b2285580335de42f9d2534f3ae7a8af"
 dependencies = [
  "proc-macro2",
  "quote",
@@ -6738,9 +6753,9 @@ checksum = "4873307b7c257eddcb50c9bedf158eb669578359fb28428bef438fec8e6ba7c2"
 
 [[package]]
 name = "tauri"
-version = "2.0.0-beta.23"
+version = "2.0.0-beta.24"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "68725c4f17f62f0fb1fa2eecaf391200bf00a9414c84f30783ddca10570690c3"
+checksum = "3eab508aad4ae86e23865e294b20a7bb89bd7afea523897b7478329b841d4295"
 dependencies = [
  "anyhow",
  "bytes",
@@ -6787,9 +6802,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-build"
-version = "2.0.0-beta.18"
+version = "2.0.0-beta.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "b1822847744f663babbfc8b7532a104734e9cf99e3408bba7109018bf9177917"
+checksum = "498f587026501e4bbc5d6273b63f8956b03c37b3d3b2027f9c756fcd468e9c62"
 dependencies = [
  "anyhow",
  "cargo_toml",
@@ -6809,9 +6824,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-codegen"
-version = "2.0.0-beta.18"
+version = "2.0.0-beta.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "8e36fa3c2e3bd935827fef1eed459885414fb27c82f687d8b9a15112c8a5c8f0"
+checksum = "43bbc731067e319ef60601bf5716d1e706ee9ae28e38c0587f7165c7d6824cdf"
 dependencies = [
  "base64 0.22.1",
  "brotli 3.5.0",
@@ -6825,7 +6840,7 @@ dependencies = [
  "serde",
  "serde_json",
  "sha2",
- "syn 2.0.70",
+ "syn 2.0.72",
  "tauri-utils",
  "thiserror",
  "time",
@@ -6836,23 +6851,23 @@ dependencies = [
 
 [[package]]
 name = "tauri-macros"
-version = "2.0.0-beta.18"
+version = "2.0.0-beta.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "34aba4bed4648c3cb17d421af5783c7c29a033a94ab8597ef3791dadea69289d"
+checksum = "36b4a44346577ccde75a24c62405a4c3b4f7a3a76614ee6cf1ed14a0b756795c"
 dependencies = [
  "heck 0.5.0",
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
  "tauri-codegen",
  "tauri-utils",
 ]
 
 [[package]]
 name = "tauri-plugin"
-version = "2.0.0-beta.18"
+version = "2.0.0-beta.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "431ac9636bf81e7a04042399918ffa6b9d2413926dabc9366a24f6b487f64653"
+checksum = "1abe0b85472516d1033ba251ac81b9f18f02725aadcaad697c8b727e6505a6ad"
 dependencies = [
  "anyhow",
  "glob",
@@ -6867,9 +6882,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-plugin-dialog"
-version = "2.0.0-beta.10"
+version = "2.0.0-beta.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "736fee091e918a46abd1431325a5ff7de78bc9ca1182f91618945173d1532bf3"
+checksum = "8860dd73c96969eb14813f9f04d8665f2853342670456fb6619d637137ef0d09"
 dependencies = [
  "dunce",
  "log",
@@ -6885,9 +6900,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-plugin-fs"
-version = "2.0.0-beta.10"
+version = "2.0.0-beta.11"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "17e1f9fb6054cbc48c9e0fda7e8c8aeaccddb4fe880163473555beeed580010e"
+checksum = "461853268fe115ca19ee21e5986d505944f0b826048fe1bd726d74753fdf1df6"
 dependencies = [
  "anyhow",
  "glob",
@@ -6904,9 +6919,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-plugin-shell"
-version = "2.0.0-beta.8"
+version = "2.0.0-beta.9"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "85f0347c4d056cca543b5f2dd74c33b64182553e03d1dba2738fe2a95f0ec9ef"
+checksum = "8a9fa8c4e3d9ec343f6c3eb081672045566128a6c48ff6f6eeea85251ff38d3f"
 dependencies = [
  "encoding_rs",
  "log",
@@ -6925,9 +6940,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-runtime"
-version = "2.0.0-beta.19"
+version = "2.0.0-beta.20"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "e5fa872242a432195b814e87f91ce10f293ae5b01fbd1eb139455496260aa7c9"
+checksum = "fe978df03966febbebc608931dc2cf26ef94df70855a18b05f07134cf474de09"
 dependencies = [
  "dpi",
  "gtk",
@@ -6944,9 +6959,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-runtime-wry"
-version = "2.0.0-beta.19"
+version = "2.0.0-beta.20"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "3ad6d5ef3c05d1c4b6cf97b9eac1ca1ad8ff2a7057ad0a92b3e4c476f009341e"
+checksum = "11e4d568f61095f507b3fc4254dfbfff3b20de2a1d66167ffca3f6d90b14db8f"
 dependencies = [
  "cocoa",
  "gtk",
@@ -6968,9 +6983,9 @@ dependencies = [
 
 [[package]]
 name = "tauri-utils"
-version = "2.0.0-beta.18"
+version = "2.0.0-beta.19"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "1f81a672883c9a67eb24727c99cce583625c919a5fb696c661603b426c463c72"
+checksum = "e20e51856f343c503892749b27d34042e6ca83a0369a12de3c5552d9874d04e8"
 dependencies = [
  "brotli 3.5.0",
  "cargo_metadata",
@@ -7042,22 +7057,22 @@ checksum = "8eaa81235c7058867fa8c0e7314f33dcce9c215f535d1913822a2b3f5e289f3c"
 
 [[package]]
 name = "thiserror"
-version = "1.0.61"
+version = "1.0.63"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "c546c80d6be4bc6a00c0f01730c08df82eaa7a7a61f11d656526506112cc1709"
+checksum = "c0342370b38b6a11b6cc11d6a805569958d54cfa061a29969c3b5ce2ea405724"
 dependencies = [
  "thiserror-impl",
 ]
 
 [[package]]
 name = "thiserror-impl"
-version = "1.0.61"
+version = "1.0.63"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "46c3384250002a6d5af4d114f2845d37b57521033f30d5c3f46c4d70e1197533"
+checksum = "a4558b58466b9ad7ca0f102865eccc95938dca1a74a856f2b57b6629050da261"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -7138,9 +7153,9 @@ checksum = "1f3ccbac311fea05f86f61904b462b55fb3df8837a366dfc601a0161d0532f20"
 
 [[package]]
 name = "tokio"
-version = "1.38.0"
+version = "1.38.1"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "ba4f4a02a7a80d6f274636f0aa95c7e383b912d41fe721a31f29e29698585a4a"
+checksum = "eb2caba9f80616f438e09748d5acda951967e1ea58508ef53d9c6402485a46df"
 dependencies = [
  "backtrace",
  "bytes",
@@ -7163,7 +7178,7 @@ checksum = "5f5ae998a069d4b5aba8ee9dad856af7d520c3699e6159b185c2acd48155d39a"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -7306,7 +7321,7 @@ checksum = "34704c8d6ebcbc939824180af020566b01a7c01f80641264eba0999f6c2b6be7"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -7695,7 +7710,7 @@ dependencies = [
  "once_cell",
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
  "wasm-bindgen-shared",
 ]
 
@@ -7729,7 +7744,7 @@ checksum = "e94f17b526d0a461a191c78ea52bbce64071ed5c04c9ffe424dcb38f74171bb7"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
  "wasm-bindgen-backend",
  "wasm-bindgen-shared",
 ]
@@ -7839,7 +7854,7 @@ checksum = "ac1345798ecd8122468840bcdf1b95e5dc6d2206c5e4b0eafa078d061f59c9bc"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -7861,9 +7876,9 @@ checksum = "53a85b86a771b1c87058196170769dd264f66c0782acf1ae6cc51bfd64b39082"
 
 [[package]]
 name = "wide"
-version = "0.7.25"
+version = "0.7.26"
 source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "2caba658a80831539b30698ae9862a72db6697dfdd7151e46920f5f2755c3ce2"
+checksum = "901e8597c777fa042e9e245bd56c0dc4418c5db3f845b6ff94fbac732c6a0692"
 dependencies = [
  "bytemuck",
  "safe_arch",
@@ -7961,7 +7976,7 @@ checksum = "9107ddc059d5b6fbfbffdfa7a7fe3e22a226def0b2608f72e9d552763d3e1ad7"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -7972,7 +7987,7 @@ checksum = "29bee4b38ea3cde66011baa44dba677c432a78593e202392d1e9070cf2a7fca7"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
@@ -8402,7 +8417,7 @@ checksum = "fa4f8080344d4671fb4e831a13ad1e68092748387dfc4f55e356242fae12ce3e"
 dependencies = [
  "proc-macro2",
  "quote",
- "syn 2.0.70",
+ "syn 2.0.72",
 ]
 
 [[package]]
diff --git a/src-tauri/Cargo.toml b/src-tauri/Cargo.toml
index faa9eae..bd146f6 100644
--- a/src-tauri/Cargo.toml
+++ b/src-tauri/Cargo.toml
@@ -13,25 +13,23 @@ crate-type = ["staticlib", "cdylib", "rlib"]
 
 
 [build-dependencies]
-tauri-build = { version = "2.0.0-beta", features = [] }
+tauri-build = { version = "2.0.0-beta.19", features = [] }
 
 [dependencies]
-tauri = { version = "2.0.0-beta", features = [] }
-tauri-plugin-shell = "2.0.0-beta"
-tauri-plugin-dialog = "2.0.0-beta"
+tauri = { version = "2.0.0-beta.24", features = [] }
+tauri-plugin-shell = "2.0.0-beta.9"
+tauri-plugin-dialog = "2.0.0-beta.11"
 serde = { version = "1.0", features = ["derive"] }
 serde_json = "1.0"
 noodles-fasta = "0.40.0"
 bio = "2.0.0"
-noodles-fastq = "0.12.0"
-filepath = "0.1.2"
+noodles-fastq = "0.13.0"
 rnapkin = "0.3.9"
 protein-translate = "0.2.0"
-exon = "0.26.1"
+exon = "0.29.1"
 
 [dev-dependencies]
-tempfile = "3.10.0"
-filesize = "0.2.0"
+tempfile = "3.10.1"
 
 
 [features]
diff --git a/src-tauri/gen/schemas/acl-manifests.json b/src-tauri/gen/schemas/acl-manifests.json
index 6e24417..ef4d955 100644
--- a/src-tauri/gen/schemas/acl-manifests.json
+++ b/src-tauri/gen/schemas/acl-manifests.json
@@ -1 +1 @@
-{"app":{"default_permission":{"identifier":"default","description":"Default permissions for the plugin.","permissions":["allow-version","allow-name","allow-tauri-version"]},"permissions":{"allow-app-hide":{"identifier":"allow-app-hide","description":"Enables the app_hide command without any pre-configured scope.","commands":{"allow":["app_hide"],"deny":[]}},"allow-app-show":{"identifier":"allow-app-show","description":"Enables the app_show command without any pre-configured scope.","commands":{"allow":["app_show"],"deny":[]}},"allow-default-window-icon":{"identifier":"allow-default-window-icon","description":"Enables the default_window_icon command without any pre-configured scope.","commands":{"allow":["default_window_icon"],"deny":[]}},"allow-name":{"identifier":"allow-name","description":"Enables the name command without any pre-configured scope.","commands":{"allow":["name"],"deny":[]}},"allow-tauri-version":{"identifier":"allow-tauri-version","description":"Enables the tauri_version command without any pre-configured scope.","commands":{"allow":["tauri_version"],"deny":[]}},"allow-version":{"identifier":"allow-version","description":"Enables the version command without any pre-configured scope.","commands":{"allow":["version"],"deny":[]}},"deny-app-hide":{"identifier":"deny-app-hide","description":"Denies the app_hide command without any pre-configured scope.","commands":{"allow":[],"deny":["app_hide"]}},"deny-app-show":{"identifier":"deny-app-show","description":"Denies the app_show command without any pre-configured scope.","commands":{"allow":[],"deny":["app_show"]}},"deny-default-window-icon":{"identifier":"deny-default-window-icon","description":"Denies the default_window_icon command without any pre-configured scope.","commands":{"allow":[],"deny":["default_window_icon"]}},"deny-name":{"identifier":"deny-name","description":"Denies the name command without any pre-configured scope.","commands":{"allow":[],"deny":["name"]}},"deny-tauri-version":{"identifier":"deny-tauri-version","description":"Denies the tauri_version command without any pre-configured scope.","commands":{"allow":[],"deny":["tauri_version"]}},"deny-version":{"identifier":"deny-version","description":"Denies the version command without any pre-configured scope.","commands":{"allow":[],"deny":["version"]}}},"permission_sets":{},"global_scope_schema":null},"dialog":{"default_permission":{"identifier":"default","description":"This permission set configures the types of dialogs\navailable from the dialog plugin.\n\n#### Granted Permissions\n\nAll dialog types are enabled.\n\n\n","permissions":["allow-ask","allow-confirm","allow-message","allow-save","allow-open"]},"permissions":{"allow-ask":{"identifier":"allow-ask","description":"Enables the ask command without any pre-configured scope.","commands":{"allow":["ask"],"deny":[]}},"allow-confirm":{"identifier":"allow-confirm","description":"Enables the confirm command without any pre-configured scope.","commands":{"allow":["confirm"],"deny":[]}},"allow-message":{"identifier":"allow-message","description":"Enables the message command without any pre-configured scope.","commands":{"allow":["message"],"deny":[]}},"allow-open":{"identifier":"allow-open","description":"Enables the open command without any pre-configured scope.","commands":{"allow":["open"],"deny":[]}},"allow-save":{"identifier":"allow-save","description":"Enables the save command without any pre-configured scope.","commands":{"allow":["save"],"deny":[]}},"deny-ask":{"identifier":"deny-ask","description":"Denies the ask command without any pre-configured scope.","commands":{"allow":[],"deny":["ask"]}},"deny-confirm":{"identifier":"deny-confirm","description":"Denies the confirm command without any pre-configured scope.","commands":{"allow":[],"deny":["confirm"]}},"deny-message":{"identifier":"deny-message","description":"Denies the message command without any pre-configured scope.","commands":{"allow":[],"deny":["message"]}},"deny-open":{"identifier":"deny-open","description":"Denies the open command without any pre-configured scope.","commands":{"allow":[],"deny":["open"]}},"deny-save":{"identifier":"deny-save","description":"Denies the save command without any pre-configured scope.","commands":{"allow":[],"deny":["save"]}}},"permission_sets":{},"global_scope_schema":null},"event":{"default_permission":{"identifier":"default","description":"Default permissions for the plugin.","permissions":["allow-listen","allow-unlisten","allow-emit","allow-emit-to"]},"permissions":{"allow-emit":{"identifier":"allow-emit","description":"Enables the emit command without any pre-configured scope.","commands":{"allow":["emit"],"deny":[]}},"allow-emit-to":{"identifier":"allow-emit-to","description":"Enables the emit_to command without any pre-configured scope.","commands":{"allow":["emit_to"],"deny":[]}},"allow-listen":{"identifier":"allow-listen","description":"Enables the listen command without any pre-configured scope.","commands":{"allow":["listen"],"deny":[]}},"allow-unlisten":{"identifier":"allow-unlisten","description":"Enables the unlisten command without any pre-configured scope.","commands":{"allow":["unlisten"],"deny":[]}},"deny-emit":{"identifier":"deny-emit","description":"Denies the emit command without any pre-configured scope.","commands":{"allow":[],"deny":["emit"]}},"deny-emit-to":{"identifier":"deny-emit-to","description":"Denies the emit_to command without any pre-configured scope.","commands":{"allow":[],"deny":["emit_to"]}},"deny-listen":{"identifier":"deny-listen","description":"Denies the listen command without any pre-configured scope.","commands":{"allow":[],"deny":["listen"]}},"deny-unlisten":{"identifier":"deny-unlisten","description":"Denies the unlisten command without any pre-configured scope.","commands":{"allow":[],"deny":["unlisten"]}}},"permission_sets":{},"global_scope_schema":null},"image":{"default_permission":{"identifier":"default","description":"Default permissions for the plugin.","permissions":["allow-new","allow-from-bytes","allow-from-path","allow-rgba","allow-size"]},"permissions":{"allow-from-bytes":{"identifier":"allow-from-bytes","description":"Enables the from_bytes command without any pre-configured scope.","commands":{"allow":["from_bytes"],"deny":[]}},"allow-from-path":{"identifier":"allow-from-path","description":"Enables the from_path command without any pre-configured scope.","commands":{"allow":["from_path"],"deny":[]}},"allow-new":{"identifier":"allow-new","description":"Enables the new command without any pre-configured scope.","commands":{"allow":["new"],"deny":[]}},"allow-rgba":{"identifier":"allow-rgba","description":"Enables the rgba command without any pre-configured scope.","commands":{"allow":["rgba"],"deny":[]}},"allow-size":{"identifier":"allow-size","description":"Enables the size command without any pre-configured scope.","commands":{"allow":["size"],"deny":[]}},"deny-from-bytes":{"identifier":"deny-from-bytes","description":"Denies the from_bytes command without any pre-configured scope.","commands":{"allow":[],"deny":["from_bytes"]}},"deny-from-path":{"identifier":"deny-from-path","description":"Denies the from_path command without any pre-configured scope.","commands":{"allow":[],"deny":["from_path"]}},"deny-new":{"identifier":"deny-new","description":"Denies the new command without any pre-configured scope.","commands":{"allow":[],"deny":["new"]}},"deny-rgba":{"identifier":"deny-rgba","description":"Denies the rgba command without any pre-configured scope.","commands":{"allow":[],"deny":["rgba"]}},"deny-size":{"identifier":"deny-size","description":"Denies the size command without any pre-configured scope.","commands":{"allow":[],"deny":["size"]}}},"permission_sets":{},"global_scope_schema":null},"menu":{"default_permission":{"identifier":"default","description":"Default permissions for the plugin.","permissions":["allow-new","allow-append","allow-prepend","allow-insert","allow-remove","allow-remove-at","allow-items","allow-get","allow-popup","allow-create-default","allow-set-as-app-menu","allow-set-as-window-menu","allow-text","allow-set-text","allow-is-enabled","allow-set-enabled","allow-set-accelerator","allow-set-as-windows-menu-for-nsapp","allow-set-as-help-menu-for-nsapp","allow-is-checked","allow-set-checked","allow-set-icon"]},"permissions":{"allow-append":{"identifier":"allow-append","description":"Enables the append command without any pre-configured scope.","commands":{"allow":["append"],"deny":[]}},"allow-create-default":{"identifier":"allow-create-default","description":"Enables the create_default command without any pre-configured scope.","commands":{"allow":["create_default"],"deny":[]}},"allow-get":{"identifier":"allow-get","description":"Enables the get command without any pre-configured scope.","commands":{"allow":["get"],"deny":[]}},"allow-insert":{"identifier":"allow-insert","description":"Enables the insert command without any pre-configured scope.","commands":{"allow":["insert"],"deny":[]}},"allow-is-checked":{"identifier":"allow-is-checked","description":"Enables the is_checked command without any pre-configured scope.","commands":{"allow":["is_checked"],"deny":[]}},"allow-is-enabled":{"identifier":"allow-is-enabled","description":"Enables the is_enabled command without any pre-configured scope.","commands":{"allow":["is_enabled"],"deny":[]}},"allow-items":{"identifier":"allow-items","description":"Enables the items command without any pre-configured scope.","commands":{"allow":["items"],"deny":[]}},"allow-new":{"identifier":"allow-new","description":"Enables the new command without any pre-configured scope.","commands":{"allow":["new"],"deny":[]}},"allow-popup":{"identifier":"allow-popup","description":"Enables the popup command without any pre-configured scope.","commands":{"allow":["popup"],"deny":[]}},"allow-prepend":{"identifier":"allow-prepend","description":"Enables the prepend command without any pre-configured scope.","commands":{"allow":["prepend"],"deny":[]}},"allow-remove":{"identifier":"allow-remove","description":"Enables the remove command without any pre-configured scope.","commands":{"allow":["remove"],"deny":[]}},"allow-remove-at":{"identifier":"allow-remove-at","description":"Enables the remove_at command without any pre-configured scope.","commands":{"allow":["remove_at"],"deny":[]}},"allow-set-accelerator":{"identifier":"allow-set-accelerator","description":"Enables the set_accelerator command without any pre-configured scope.","commands":{"allow":["set_accelerator"],"deny":[]}},"allow-set-as-app-menu":{"identifier":"allow-set-as-app-menu","description":"Enables the set_as_app_menu command without any pre-configured scope.","commands":{"allow":["set_as_app_menu"],"deny":[]}},"allow-set-as-help-menu-for-nsapp":{"identifier":"allow-set-as-help-menu-for-nsapp","description":"Enables the set_as_help_menu_for_nsapp command without any pre-configured scope.","commands":{"allow":["set_as_help_menu_for_nsapp"],"deny":[]}},"allow-set-as-window-menu":{"identifier":"allow-set-as-window-menu","description":"Enables the set_as_window_menu command without any pre-configured scope.","commands":{"allow":["set_as_window_menu"],"deny":[]}},"allow-set-as-windows-menu-for-nsapp":{"identifier":"allow-set-as-windows-menu-for-nsapp","description":"Enables the set_as_windows_menu_for_nsapp command without any pre-configured scope.","commands":{"allow":["set_as_windows_menu_for_nsapp"],"deny":[]}},"allow-set-checked":{"identifier":"allow-set-checked","description":"Enables the set_checked command without any pre-configured scope.","commands":{"allow":["set_checked"],"deny":[]}},"allow-set-enabled":{"identifier":"allow-set-enabled","description":"Enables the set_enabled command without any pre-configured scope.","commands":{"allow":["set_enabled"],"deny":[]}},"allow-set-icon":{"identifier":"allow-set-icon","description":"Enables the set_icon command without any pre-configured scope.","commands":{"allow":["set_icon"],"deny":[]}},"allow-set-text":{"identifier":"allow-set-text","description":"Enables the set_text command without any pre-configured scope.","commands":{"allow":["set_text"],"deny":[]}},"allow-text":{"identifier":"allow-text","description":"Enables the text command without any pre-configured scope.","commands":{"allow":["text"],"deny":[]}},"deny-append":{"identifier":"deny-append","description":"Denies the append command without any pre-configured scope.","commands":{"allow":[],"deny":["append"]}},"deny-create-default":{"identifier":"deny-create-default","description":"Denies the create_default command without any pre-configured scope.","commands":{"allow":[],"deny":["create_default"]}},"deny-get":{"identifier":"deny-get","description":"Denies the get command without any pre-configured scope.","commands":{"allow":[],"deny":["get"]}},"deny-insert":{"identifier":"deny-insert","description":"Denies the insert command without any pre-configured scope.","commands":{"allow":[],"deny":["insert"]}},"deny-is-checked":{"identifier":"deny-is-checked","description":"Denies the is_checked command without any pre-configured scope.","commands":{"allow":[],"deny":["is_checked"]}},"deny-is-enabled":{"identifier":"deny-is-enabled","description":"Denies the is_enabled command without any pre-configured scope.","commands":{"allow":[],"deny":["is_enabled"]}},"deny-items":{"identifier":"deny-items","description":"Denies the items command without any pre-configured scope.","commands":{"allow":[],"deny":["items"]}},"deny-new":{"identifier":"deny-new","description":"Denies the new command without any 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the set_as_app_menu command without any pre-configured scope.","commands":{"allow":[],"deny":["set_as_app_menu"]}},"deny-set-as-help-menu-for-nsapp":{"identifier":"deny-set-as-help-menu-for-nsapp","description":"Denies the set_as_help_menu_for_nsapp command without any pre-configured scope.","commands":{"allow":[],"deny":["set_as_help_menu_for_nsapp"]}},"deny-set-as-window-menu":{"identifier":"deny-set-as-window-menu","description":"Denies the set_as_window_menu command without any pre-configured scope.","commands":{"allow":[],"deny":["set_as_window_menu"]}},"deny-set-as-windows-menu-for-nsapp":{"identifier":"deny-set-as-windows-menu-for-nsapp","description":"Denies the set_as_windows_menu_for_nsapp command without any pre-configured scope.","commands":{"allow":[],"deny":["set_as_windows_menu_for_nsapp"]}},"deny-set-checked":{"identifier":"deny-set-checked","description":"Denies the set_checked command without any pre-configured scope.","commands":{"allow":[],"deny":["set_checked"]}},"deny-set-enabled":{"identifier":"deny-set-enabled","description":"Denies the set_enabled command without any pre-configured scope.","commands":{"allow":[],"deny":["set_enabled"]}},"deny-set-icon":{"identifier":"deny-set-icon","description":"Denies the set_icon command without any pre-configured scope.","commands":{"allow":[],"deny":["set_icon"]}},"deny-set-text":{"identifier":"deny-set-text","description":"Denies the set_text command without any pre-configured scope.","commands":{"allow":[],"deny":["set_text"]}},"deny-text":{"identifier":"deny-text","description":"Denies the text command without any pre-configured scope.","commands":{"allow":[],"deny":["text"]}}},"permission_sets":{},"global_scope_schema":null},"path":{"default_permission":{"identifier":"default","description":"Default permissions for the 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scope.","commands":{"allow":["join"],"deny":[]}},"allow-normalize":{"identifier":"allow-normalize","description":"Enables the normalize command without any pre-configured scope.","commands":{"allow":["normalize"],"deny":[]}},"allow-resolve":{"identifier":"allow-resolve","description":"Enables the resolve command without any pre-configured scope.","commands":{"allow":["resolve"],"deny":[]}},"allow-resolve-directory":{"identifier":"allow-resolve-directory","description":"Enables the resolve_directory command without any pre-configured scope.","commands":{"allow":["resolve_directory"],"deny":[]}},"deny-basename":{"identifier":"deny-basename","description":"Denies the basename command without any pre-configured scope.","commands":{"allow":[],"deny":["basename"]}},"deny-dirname":{"identifier":"deny-dirname","description":"Denies the dirname command without any pre-configured scope.","commands":{"allow":[],"deny":["dirname"]}},"deny-extname":{"identifier":"deny-extname","description":"Denies the extname command without any pre-configured scope.","commands":{"allow":[],"deny":["extname"]}},"deny-is-absolute":{"identifier":"deny-is-absolute","description":"Denies the is_absolute command without any pre-configured scope.","commands":{"allow":[],"deny":["is_absolute"]}},"deny-join":{"identifier":"deny-join","description":"Denies the join command without any pre-configured scope.","commands":{"allow":[],"deny":["join"]}},"deny-normalize":{"identifier":"deny-normalize","description":"Denies the normalize command without any pre-configured scope.","commands":{"allow":[],"deny":["normalize"]}},"deny-resolve":{"identifier":"deny-resolve","description":"Denies the resolve command without any pre-configured scope.","commands":{"allow":[],"deny":["resolve"]}},"deny-resolve-directory":{"identifier":"deny-resolve-directory","description":"Denies the resolve_directory command without any pre-configured 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It will allow opening `http(s)://`,\n`tel:` and `mailto:` links.\n","permissions":["allow-open"]},"permissions":{"allow-execute":{"identifier":"allow-execute","description":"Enables the execute command without any pre-configured scope.","commands":{"allow":["execute"],"deny":[]}},"allow-kill":{"identifier":"allow-kill","description":"Enables the kill command without any pre-configured scope.","commands":{"allow":["kill"],"deny":[]}},"allow-open":{"identifier":"allow-open","description":"Enables the open command without any pre-configured scope.","commands":{"allow":["open"],"deny":[]}},"allow-spawn":{"identifier":"allow-spawn","description":"Enables the spawn command without any pre-configured scope.","commands":{"allow":["spawn"],"deny":[]}},"allow-stdin-write":{"identifier":"allow-stdin-write","description":"Enables the stdin_write command without any pre-configured scope.","commands":{"allow":["stdin_write"],"deny":[]}},"deny-execute":{"identifier":"deny-execute","description":"Denies the execute command without any pre-configured scope.","commands":{"allow":[],"deny":["execute"]}},"deny-kill":{"identifier":"deny-kill","description":"Denies the kill command without any pre-configured scope.","commands":{"allow":[],"deny":["kill"]}},"deny-open":{"identifier":"deny-open","description":"Denies the open command without any pre-configured scope.","commands":{"allow":[],"deny":["open"]}},"deny-spawn":{"identifier":"deny-spawn","description":"Denies the spawn command without any pre-configured scope.","commands":{"allow":[],"deny":["spawn"]}},"deny-stdin-write":{"identifier":"deny-stdin-write","description":"Denies the stdin_write command without any pre-configured scope.","commands":{"allow":[],"deny":["stdin_write"]}}},"permission_sets":{},"global_scope_schema":{"$schema":"http://json-schema.org/draft-07/schema#","definitions":{"ShellAllowedArg":{"anyOf":[{"description":"A non-configurable argument that is passed to the command in the order it was specified.","type":"string"},{"additionalProperties":false,"description":"A variable that is set while calling the command from the webview API.","properties":{"validator":{"description":"[regex] validator to require passed values to conform to an expected input.\n\nThis will require the argument value passed to this variable to match the `validator` regex before it will be executed.\n\n[regex]: https://docs.rs/regex/latest/regex/#syntax","type":"string"}},"required":["validator"],"type":"object"}],"description":"A command argument allowed to be executed by the webview API."},"ShellAllowedArgs":{"anyOf":[{"description":"Use a simple boolean to allow all or disable all arguments to this command configuration.","type":"boolean"},{"description":"A specific set of [`ShellAllowedArg`] that are valid to call for the command configuration.","items":{"$ref":"#/definitions/ShellAllowedArg"},"type":"array"}],"description":"A set of command arguments allowed to be executed by the webview API.\n\nA value of `true` will allow any arguments to be passed to the command. `false` will disable all arguments. 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The variables are: `$AUDIO`, `$CACHE`, `$CONFIG`, `$DATA`, `$LOCALDATA`, `$DESKTOP`, `$DOCUMENT`, `$DOWNLOAD`, `$EXE`, `$FONT`, `$HOME`, `$PICTURE`, `$PUBLIC`, `$RUNTIME`, `$TEMPLATE`, `$VIDEO`, `$RESOURCE`, `$APP`, `$LOG`, `$TEMP`, `$APPCONFIG`, `$APPDATA`, `$APPLOCALDATA`, `$APPCACHE`, `$APPLOG`.","type":"string"},"name":{"description":"The name for this allowed shell command configuration.\n\nThis name will be used inside of the webview API to call this command along with any specified arguments.","type":"string"},"sidecar":{"description":"If this command is a sidecar command.","type":"boolean"}},"required":["args","cmd","name","sidecar"],"title":"Entry","type":"object"}},"tray":{"default_permission":{"identifier":"default","description":"Default permissions for the 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scope.","commands":{"allow":["set_cursor_visible"],"deny":[]}},"allow-set-decorations":{"identifier":"allow-set-decorations","description":"Enables the set_decorations command without any pre-configured scope.","commands":{"allow":["set_decorations"],"deny":[]}},"allow-set-effects":{"identifier":"allow-set-effects","description":"Enables the set_effects command without any pre-configured scope.","commands":{"allow":["set_effects"],"deny":[]}},"allow-set-focus":{"identifier":"allow-set-focus","description":"Enables the set_focus command without any pre-configured scope.","commands":{"allow":["set_focus"],"deny":[]}},"allow-set-fullscreen":{"identifier":"allow-set-fullscreen","description":"Enables the set_fullscreen command without any pre-configured scope.","commands":{"allow":["set_fullscreen"],"deny":[]}},"allow-set-icon":{"identifier":"allow-set-icon","description":"Enables the set_icon command without any pre-configured 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\ No newline at end of file
+{"app":{"default_permission":{"identifier":"default","description":"Default permissions for the plugin.","permissions":["allow-version","allow-name","allow-tauri-version"]},"permissions":{"allow-app-hide":{"identifier":"allow-app-hide","description":"Enables the app_hide command without any pre-configured scope.","commands":{"allow":["app_hide"],"deny":[]}},"allow-app-show":{"identifier":"allow-app-show","description":"Enables the app_show command without any pre-configured scope.","commands":{"allow":["app_show"],"deny":[]}},"allow-default-window-icon":{"identifier":"allow-default-window-icon","description":"Enables the default_window_icon command without any pre-configured scope.","commands":{"allow":["default_window_icon"],"deny":[]}},"allow-name":{"identifier":"allow-name","description":"Enables the name command without any pre-configured scope.","commands":{"allow":["name"],"deny":[]}},"allow-tauri-version":{"identifier":"allow-tauri-version","description":"Enables the tauri_version command without any pre-configured scope.","commands":{"allow":["tauri_version"],"deny":[]}},"allow-version":{"identifier":"allow-version","description":"Enables the version command without any pre-configured scope.","commands":{"allow":["version"],"deny":[]}},"deny-app-hide":{"identifier":"deny-app-hide","description":"Denies the app_hide command without any pre-configured scope.","commands":{"allow":[],"deny":["app_hide"]}},"deny-app-show":{"identifier":"deny-app-show","description":"Denies the app_show command without any pre-configured scope.","commands":{"allow":[],"deny":["app_show"]}},"deny-default-window-icon":{"identifier":"deny-default-window-icon","description":"Denies the default_window_icon command without any pre-configured scope.","commands":{"allow":[],"deny":["default_window_icon"]}},"deny-name":{"identifier":"deny-name","description":"Denies the name command without any pre-configured 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scope.","commands":{"allow":["emit_to"],"deny":[]}},"allow-listen":{"identifier":"allow-listen","description":"Enables the listen command without any pre-configured scope.","commands":{"allow":["listen"],"deny":[]}},"allow-unlisten":{"identifier":"allow-unlisten","description":"Enables the unlisten command without any pre-configured scope.","commands":{"allow":["unlisten"],"deny":[]}},"deny-emit":{"identifier":"deny-emit","description":"Denies the emit command without any pre-configured scope.","commands":{"allow":[],"deny":["emit"]}},"deny-emit-to":{"identifier":"deny-emit-to","description":"Denies the emit_to command without any pre-configured scope.","commands":{"allow":[],"deny":["emit_to"]}},"deny-listen":{"identifier":"deny-listen","description":"Denies the listen command without any pre-configured scope.","commands":{"allow":[],"deny":["listen"]}},"deny-unlisten":{"identifier":"deny-unlisten","description":"Denies the unlisten command without any pre-configured 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the set_as_app_menu command without any pre-configured scope.","commands":{"allow":["set_as_app_menu"],"deny":[]}},"allow-set-as-help-menu-for-nsapp":{"identifier":"allow-set-as-help-menu-for-nsapp","description":"Enables the set_as_help_menu_for_nsapp command without any pre-configured scope.","commands":{"allow":["set_as_help_menu_for_nsapp"],"deny":[]}},"allow-set-as-window-menu":{"identifier":"allow-set-as-window-menu","description":"Enables the set_as_window_menu command without any pre-configured scope.","commands":{"allow":["set_as_window_menu"],"deny":[]}},"allow-set-as-windows-menu-for-nsapp":{"identifier":"allow-set-as-windows-menu-for-nsapp","description":"Enables the set_as_windows_menu_for_nsapp command without any pre-configured scope.","commands":{"allow":["set_as_windows_menu_for_nsapp"],"deny":[]}},"allow-set-checked":{"identifier":"allow-set-checked","description":"Enables the set_checked command without any pre-configured 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scope.","commands":{"allow":[],"deny":["set_checked"]}},"deny-set-enabled":{"identifier":"deny-set-enabled","description":"Denies the set_enabled command without any pre-configured scope.","commands":{"allow":[],"deny":["set_enabled"]}},"deny-set-icon":{"identifier":"deny-set-icon","description":"Denies the set_icon command without any pre-configured scope.","commands":{"allow":[],"deny":["set_icon"]}},"deny-set-text":{"identifier":"deny-set-text","description":"Denies the set_text command without any pre-configured scope.","commands":{"allow":[],"deny":["set_text"]}},"deny-text":{"identifier":"deny-text","description":"Denies the text command without any pre-configured scope.","commands":{"allow":[],"deny":["text"]}}},"permission_sets":{},"global_scope_schema":null},"path":{"default_permission":{"identifier":"default","description":"Default permissions for the 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scope.","commands":{"allow":["join"],"deny":[]}},"allow-normalize":{"identifier":"allow-normalize","description":"Enables the normalize command without any pre-configured scope.","commands":{"allow":["normalize"],"deny":[]}},"allow-resolve":{"identifier":"allow-resolve","description":"Enables the resolve command without any pre-configured scope.","commands":{"allow":["resolve"],"deny":[]}},"allow-resolve-directory":{"identifier":"allow-resolve-directory","description":"Enables the resolve_directory command without any pre-configured scope.","commands":{"allow":["resolve_directory"],"deny":[]}},"deny-basename":{"identifier":"deny-basename","description":"Denies the basename command without any pre-configured scope.","commands":{"allow":[],"deny":["basename"]}},"deny-dirname":{"identifier":"deny-dirname","description":"Denies the dirname command without any pre-configured scope.","commands":{"allow":[],"deny":["dirname"]}},"deny-extname":{"identifier":"deny-extname","description":"Denies 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It will allow opening `http(s)://`,\n`tel:` and `mailto:` links.\n","permissions":["allow-open"]},"permissions":{"allow-execute":{"identifier":"allow-execute","description":"Enables the execute command without any pre-configured scope.","commands":{"allow":["execute"],"deny":[]}},"allow-kill":{"identifier":"allow-kill","description":"Enables the kill command without any pre-configured scope.","commands":{"allow":["kill"],"deny":[]}},"allow-open":{"identifier":"allow-open","description":"Enables the open command without any pre-configured scope.","commands":{"allow":["open"],"deny":[]}},"allow-spawn":{"identifier":"allow-spawn","description":"Enables the spawn command without any pre-configured scope.","commands":{"allow":["spawn"],"deny":[]}},"allow-stdin-write":{"identifier":"allow-stdin-write","description":"Enables the stdin_write command without any pre-configured scope.","commands":{"allow":["stdin_write"],"deny":[]}},"deny-execute":{"identifier":"deny-execute","description":"Denies the execute command without any pre-configured scope.","commands":{"allow":[],"deny":["execute"]}},"deny-kill":{"identifier":"deny-kill","description":"Denies the kill command without any pre-configured scope.","commands":{"allow":[],"deny":["kill"]}},"deny-open":{"identifier":"deny-open","description":"Denies the open command without any pre-configured scope.","commands":{"allow":[],"deny":["open"]}},"deny-spawn":{"identifier":"deny-spawn","description":"Denies the spawn command without any pre-configured scope.","commands":{"allow":[],"deny":["spawn"]}},"deny-stdin-write":{"identifier":"deny-stdin-write","description":"Denies the stdin_write command without any pre-configured scope.","commands":{"allow":[],"deny":["stdin_write"]}}},"permission_sets":{},"global_scope_schema":{"$schema":"http://json-schema.org/draft-07/schema#","definitions":{"ShellAllowedArg":{"anyOf":[{"description":"A non-configurable argument that is passed to the command in the order it was specified.","type":"string"},{"additionalProperties":false,"description":"A variable that is set while calling the command from the webview API.","properties":{"validator":{"description":"[regex] validator to require passed values to conform to an expected input.\n\nThis will require the argument value passed to this variable to match the `validator` regex before it will be executed.\n\n[regex]: https://docs.rs/regex/latest/regex/#syntax","type":"string"}},"required":["validator"],"type":"object"}],"description":"A command argument allowed to be executed by the webview API."},"ShellAllowedArgs":{"anyOf":[{"description":"Use a simple boolean to allow all or disable all arguments to this command configuration.","type":"boolean"},{"description":"A specific set of [`ShellAllowedArg`] that are valid to call for the command configuration.","items":{"$ref":"#/definitions/ShellAllowedArg"},"type":"array"}],"description":"A set of command arguments allowed to be executed by the webview API.\n\nA value of `true` will allow any arguments to be passed to the command. `false` will disable all arguments. 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The variables are: `$AUDIO`, `$CACHE`, `$CONFIG`, `$DATA`, `$LOCALDATA`, `$DESKTOP`, `$DOCUMENT`, `$DOWNLOAD`, `$EXE`, `$FONT`, `$HOME`, `$PICTURE`, `$PUBLIC`, `$RUNTIME`, `$TEMPLATE`, `$VIDEO`, `$RESOURCE`, `$APP`, `$LOG`, `$TEMP`, `$APPCONFIG`, `$APPDATA`, `$APPLOCALDATA`, `$APPCACHE`, `$APPLOG`.","type":"string"},"name":{"description":"The name for this allowed shell command configuration.\n\nThis name will be used inside of the webview API to call this command along with any specified arguments.","type":"string"},"sidecar":{"description":"If this command is a sidecar command.","type":"boolean"}},"required":["args","cmd","name","sidecar"],"title":"Entry","type":"object"}},"tray":{"default_permission":{"identifier":"default","description":"Default permissions for the 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scope.","commands":{"allow":["is_minimizable"],"deny":[]}},"allow-is-minimized":{"identifier":"allow-is-minimized","description":"Enables the is_minimized command without any pre-configured scope.","commands":{"allow":["is_minimized"],"deny":[]}},"allow-is-resizable":{"identifier":"allow-is-resizable","description":"Enables the is_resizable command without any pre-configured scope.","commands":{"allow":["is_resizable"],"deny":[]}},"allow-is-visible":{"identifier":"allow-is-visible","description":"Enables the is_visible command without any pre-configured scope.","commands":{"allow":["is_visible"],"deny":[]}},"allow-maximize":{"identifier":"allow-maximize","description":"Enables the maximize command without any pre-configured scope.","commands":{"allow":["maximize"],"deny":[]}},"allow-minimize":{"identifier":"allow-minimize","description":"Enables the minimize command without any pre-configured scope.","commands":{"allow":["minimize"],"deny":[]}},"allow-monitor-from-point":{"identifier":"allow-monitor-from-point","description":"Enables the monitor_from_point command without any pre-configured scope.","commands":{"allow":["monitor_from_point"],"deny":[]}},"allow-outer-position":{"identifier":"allow-outer-position","description":"Enables the outer_position command without any pre-configured scope.","commands":{"allow":["outer_position"],"deny":[]}},"allow-outer-size":{"identifier":"allow-outer-size","description":"Enables the outer_size command without any pre-configured scope.","commands":{"allow":["outer_size"],"deny":[]}},"allow-primary-monitor":{"identifier":"allow-primary-monitor","description":"Enables the primary_monitor command without any pre-configured scope.","commands":{"allow":["primary_monitor"],"deny":[]}},"allow-request-user-attention":{"identifier":"allow-request-user-attention","description":"Enables the request_user_attention command without any pre-configured scope.","commands":{"allow":["request_user_attention"],"deny":[]}},"allow-scale-factor":{"identifier":"allow-scale-factor","description":"Enables the scale_factor command without any pre-configured scope.","commands":{"allow":["scale_factor"],"deny":[]}},"allow-set-always-on-bottom":{"identifier":"allow-set-always-on-bottom","description":"Enables the set_always_on_bottom command without any pre-configured scope.","commands":{"allow":["set_always_on_bottom"],"deny":[]}},"allow-set-always-on-top":{"identifier":"allow-set-always-on-top","description":"Enables the set_always_on_top command without any pre-configured scope.","commands":{"allow":["set_always_on_top"],"deny":[]}},"allow-set-closable":{"identifier":"allow-set-closable","description":"Enables the set_closable command without any pre-configured scope.","commands":{"allow":["set_closable"],"deny":[]}},"allow-set-content-protected":{"identifier":"allow-set-content-protected","description":"Enables the set_content_protected command without any pre-configured scope.","commands":{"allow":["set_content_protected"],"deny":[]}},"allow-set-cursor-grab":{"identifier":"allow-set-cursor-grab","description":"Enables the set_cursor_grab command without any pre-configured scope.","commands":{"allow":["set_cursor_grab"],"deny":[]}},"allow-set-cursor-icon":{"identifier":"allow-set-cursor-icon","description":"Enables the set_cursor_icon command without any pre-configured scope.","commands":{"allow":["set_cursor_icon"],"deny":[]}},"allow-set-cursor-position":{"identifier":"allow-set-cursor-position","description":"Enables the set_cursor_position command without any pre-configured scope.","commands":{"allow":["set_cursor_position"],"deny":[]}},"allow-set-cursor-visible":{"identifier":"allow-set-cursor-visible","description":"Enables the set_cursor_visible command without any pre-configured scope.","commands":{"allow":["set_cursor_visible"],"deny":[]}},"allow-set-decorations":{"identifier":"allow-set-decorations","description":"Enables the set_decorations command without any pre-configured scope.","commands":{"allow":["set_decorations"],"deny":[]}},"allow-set-effects":{"identifier":"allow-set-effects","description":"Enables the set_effects command without any pre-configured scope.","commands":{"allow":["set_effects"],"deny":[]}},"allow-set-focus":{"identifier":"allow-set-focus","description":"Enables the set_focus command without any pre-configured scope.","commands":{"allow":["set_focus"],"deny":[]}},"allow-set-fullscreen":{"identifier":"allow-set-fullscreen","description":"Enables the set_fullscreen command without any pre-configured scope.","commands":{"allow":["set_fullscreen"],"deny":[]}},"allow-set-icon":{"identifier":"allow-set-icon","description":"Enables the set_icon command without any pre-configured scope.","commands":{"allow":["set_icon"],"deny":[]}},"allow-set-ignore-cursor-events":{"identifier":"allow-set-ignore-cursor-events","description":"Enables the set_ignore_cursor_events command without any pre-configured scope.","commands":{"allow":["set_ignore_cursor_events"],"deny":[]}},"allow-set-max-size":{"identifier":"allow-set-max-size","description":"Enables the set_max_size command without any pre-configured scope.","commands":{"allow":["set_max_size"],"deny":[]}},"allow-set-maximizable":{"identifier":"allow-set-maximizable","description":"Enables the set_maximizable command without any pre-configured scope.","commands":{"allow":["set_maximizable"],"deny":[]}},"allow-set-min-size":{"identifier":"allow-set-min-size","description":"Enables the set_min_size command without any pre-configured scope.","commands":{"allow":["set_min_size"],"deny":[]}},"allow-set-minimizable":{"identifier":"allow-set-minimizable","description":"Enables the set_minimizable command without any pre-configured scope.","commands":{"allow":["set_minimizable"],"deny":[]}},"allow-set-position":{"identifier":"allow-set-position","description":"Enables the set_position command without any pre-configured scope.","commands":{"allow":["set_position"],"deny":[]}},"allow-set-progress-bar":{"identifier":"allow-set-progress-bar","description":"Enables the set_progress_bar command without any pre-configured scope.","commands":{"allow":["set_progress_bar"],"deny":[]}},"allow-set-resizable":{"identifier":"allow-set-resizable","description":"Enables the set_resizable command without any pre-configured scope.","commands":{"allow":["set_resizable"],"deny":[]}},"allow-set-shadow":{"identifier":"allow-set-shadow","description":"Enables the set_shadow command without any pre-configured scope.","commands":{"allow":["set_shadow"],"deny":[]}},"allow-set-size":{"identifier":"allow-set-size","description":"Enables the set_size command without any pre-configured scope.","commands":{"allow":["set_size"],"deny":[]}},"allow-set-skip-taskbar":{"identifier":"allow-set-skip-taskbar","description":"Enables the set_skip_taskbar command without any pre-configured scope.","commands":{"allow":["set_skip_taskbar"],"deny":[]}},"allow-set-title":{"identifier":"allow-set-title","description":"Enables the set_title command without any pre-configured scope.","commands":{"allow":["set_title"],"deny":[]}},"allow-set-title-bar-style":{"identifier":"allow-set-title-bar-style","description":"Enables the set_title_bar_style command without any pre-configured scope.","commands":{"allow":["set_title_bar_style"],"deny":[]}},"allow-set-visible-on-all-workspaces":{"identifier":"allow-set-visible-on-all-workspaces","description":"Enables the set_visible_on_all_workspaces command without any pre-configured scope.","commands":{"allow":["set_visible_on_all_workspaces"],"deny":[]}},"allow-show":{"identifier":"allow-show","description":"Enables the show command without any pre-configured scope.","commands":{"allow":["show"],"deny":[]}},"allow-start-dragging":{"identifier":"allow-start-dragging","description":"Enables the start_dragging command without any pre-configured scope.","commands":{"allow":["start_dragging"],"deny":[]}},"allow-start-resize-dragging":{"identifier":"allow-start-resize-dragging","description":"Enables the start_resize_dragging command without any pre-configured scope.","commands":{"allow":["start_resize_dragging"],"deny":[]}},"allow-theme":{"identifier":"allow-theme","description":"Enables the theme command without any pre-configured scope.","commands":{"allow":["theme"],"deny":[]}},"allow-title":{"identifier":"allow-title","description":"Enables the title command without any pre-configured scope.","commands":{"allow":["title"],"deny":[]}},"allow-toggle-maximize":{"identifier":"allow-toggle-maximize","description":"Enables the toggle_maximize command without any pre-configured scope.","commands":{"allow":["toggle_maximize"],"deny":[]}},"allow-unmaximize":{"identifier":"allow-unmaximize","description":"Enables the unmaximize command without any pre-configured scope.","commands":{"allow":["unmaximize"],"deny":[]}},"allow-unminimize":{"identifier":"allow-unminimize","description":"Enables the unminimize command without any pre-configured scope.","commands":{"allow":["unminimize"],"deny":[]}},"deny-available-monitors":{"identifier":"deny-available-monitors","description":"Denies the available_monitors command without any pre-configured scope.","commands":{"allow":[],"deny":["available_monitors"]}},"deny-center":{"identifier":"deny-center","description":"Denies the center command without any pre-configured scope.","commands":{"allow":[],"deny":["center"]}},"deny-close":{"identifier":"deny-close","description":"Denies the close command without any pre-configured scope.","commands":{"allow":[],"deny":["close"]}},"deny-create":{"identifier":"deny-create","description":"Denies the create command without any pre-configured scope.","commands":{"allow":[],"deny":["create"]}},"deny-current-monitor":{"identifier":"deny-current-monitor","description":"Denies the current_monitor command without any pre-configured scope.","commands":{"allow":[],"deny":["current_monitor"]}},"deny-cursor-position":{"identifier":"deny-cursor-position","description":"Denies the cursor_position command without any pre-configured scope.","commands":{"allow":[],"deny":["cursor_position"]}},"deny-destroy":{"identifier":"deny-destroy","description":"Denies the destroy command without any pre-configured scope.","commands":{"allow":[],"deny":["destroy"]}},"deny-hide":{"identifier":"deny-hide","description":"Denies the hide command without any pre-configured scope.","commands":{"allow":[],"deny":["hide"]}},"deny-inner-position":{"identifier":"deny-inner-position","description":"Denies the inner_position command without any pre-configured scope.","commands":{"allow":[],"deny":["inner_position"]}},"deny-inner-size":{"identifier":"deny-inner-size","description":"Denies the inner_size command without any pre-configured scope.","commands":{"allow":[],"deny":["inner_size"]}},"deny-internal-toggle-maximize":{"identifier":"deny-internal-toggle-maximize","description":"Denies the internal_toggle_maximize command without any pre-configured scope.","commands":{"allow":[],"deny":["internal_toggle_maximize"]}},"deny-is-closable":{"identifier":"deny-is-closable","description":"Denies the is_closable command without any pre-configured scope.","commands":{"allow":[],"deny":["is_closable"]}},"deny-is-decorated":{"identifier":"deny-is-decorated","description":"Denies the is_decorated command without any pre-configured scope.","commands":{"allow":[],"deny":["is_decorated"]}},"deny-is-focused":{"identifier":"deny-is-focused","description":"Denies the is_focused command without any pre-configured scope.","commands":{"allow":[],"deny":["is_focused"]}},"deny-is-fullscreen":{"identifier":"deny-is-fullscreen","description":"Denies the is_fullscreen command without any pre-configured scope.","commands":{"allow":[],"deny":["is_fullscreen"]}},"deny-is-maximizable":{"identifier":"deny-is-maximizable","description":"Denies the is_maximizable command without any pre-configured scope.","commands":{"allow":[],"deny":["is_maximizable"]}},"deny-is-maximized":{"identifier":"deny-is-maximized","description":"Denies the is_maximized command without any pre-configured scope.","commands":{"allow":[],"deny":["is_maximized"]}},"deny-is-minimizable":{"identifier":"deny-is-minimizable","description":"Denies the is_minimizable command without any pre-configured scope.","commands":{"allow":[],"deny":["is_minimizable"]}},"deny-is-minimized":{"identifier":"deny-is-minimized","description":"Denies the is_minimized command without any pre-configured scope.","commands":{"allow":[],"deny":["is_minimized"]}},"deny-is-resizable":{"identifier":"deny-is-resizable","description":"Denies the is_resizable command without any pre-configured scope.","commands":{"allow":[],"deny":["is_resizable"]}},"deny-is-visible":{"identifier":"deny-is-visible","description":"Denies the is_visible command without any pre-configured scope.","commands":{"allow":[],"deny":["is_visible"]}},"deny-maximize":{"identifier":"deny-maximize","description":"Denies the maximize command without any pre-configured scope.","commands":{"allow":[],"deny":["maximize"]}},"deny-minimize":{"identifier":"deny-minimize","description":"Denies the minimize command without any pre-configured scope.","commands":{"allow":[],"deny":["minimize"]}},"deny-monitor-from-point":{"identifier":"deny-monitor-from-point","description":"Denies the monitor_from_point command without any pre-configured scope.","commands":{"allow":[],"deny":["monitor_from_point"]}},"deny-outer-position":{"identifier":"deny-outer-position","description":"Denies the outer_position command without any pre-configured scope.","commands":{"allow":[],"deny":["outer_position"]}},"deny-outer-size":{"identifier":"deny-outer-size","description":"Denies the outer_size command without any pre-configured scope.","commands":{"allow":[],"deny":["outer_size"]}},"deny-primary-monitor":{"identifier":"deny-primary-monitor","description":"Denies the primary_monitor command without any pre-configured scope.","commands":{"allow":[],"deny":["primary_monitor"]}},"deny-request-user-attention":{"identifier":"deny-request-user-attention","description":"Denies the request_user_attention command without any pre-configured scope.","commands":{"allow":[],"deny":["request_user_attention"]}},"deny-scale-factor":{"identifier":"deny-scale-factor","description":"Denies the scale_factor command without any pre-configured scope.","commands":{"allow":[],"deny":["scale_factor"]}},"deny-set-always-on-bottom":{"identifier":"deny-set-always-on-bottom","description":"Denies the set_always_on_bottom command without any pre-configured scope.","commands":{"allow":[],"deny":["set_always_on_bottom"]}},"deny-set-always-on-top":{"identifier":"deny-set-always-on-top","description":"Denies the set_always_on_top command without any pre-configured scope.","commands":{"allow":[],"deny":["set_always_on_top"]}},"deny-set-closable":{"identifier":"deny-set-closable","description":"Denies the set_closable command without any pre-configured scope.","commands":{"allow":[],"deny":["set_closable"]}},"deny-set-content-protected":{"identifier":"deny-set-content-protected","description":"Denies the set_content_protected command without any pre-configured scope.","commands":{"allow":[],"deny":["set_content_protected"]}},"deny-set-cursor-grab":{"identifier":"deny-set-cursor-grab","description":"Denies the set_cursor_grab command without any pre-configured scope.","commands":{"allow":[],"deny":["set_cursor_grab"]}},"deny-set-cursor-icon":{"identifier":"deny-set-cursor-icon","description":"Denies the set_cursor_icon command without any pre-configured scope.","commands":{"allow":[],"deny":["set_cursor_icon"]}},"deny-set-cursor-position":{"identifier":"deny-set-cursor-position","description":"Denies the set_cursor_position command without any pre-configured scope.","commands":{"allow":[],"deny":["set_cursor_position"]}},"deny-set-cursor-visible":{"identifier":"deny-set-cursor-visible","description":"Denies the set_cursor_visible command without any pre-configured scope.","commands":{"allow":[],"deny":["set_cursor_visible"]}},"deny-set-decorations":{"identifier":"deny-set-decorations","description":"Denies the set_decorations command without any pre-configured scope.","commands":{"allow":[],"deny":["set_decorations"]}},"deny-set-effects":{"identifier":"deny-set-effects","description":"Denies the set_effects command without any pre-configured scope.","commands":{"allow":[],"deny":["set_effects"]}},"deny-set-focus":{"identifier":"deny-set-focus","description":"Denies the set_focus command without any pre-configured scope.","commands":{"allow":[],"deny":["set_focus"]}},"deny-set-fullscreen":{"identifier":"deny-set-fullscreen","description":"Denies the set_fullscreen command without any pre-configured scope.","commands":{"allow":[],"deny":["set_fullscreen"]}},"deny-set-icon":{"identifier":"deny-set-icon","description":"Denies the set_icon command without any pre-configured scope.","commands":{"allow":[],"deny":["set_icon"]}},"deny-set-ignore-cursor-events":{"identifier":"deny-set-ignore-cursor-events","description":"Denies the set_ignore_cursor_events command without any pre-configured scope.","commands":{"allow":[],"deny":["set_ignore_cursor_events"]}},"deny-set-max-size":{"identifier":"deny-set-max-size","description":"Denies the set_max_size command without any pre-configured scope.","commands":{"allow":[],"deny":["set_max_size"]}},"deny-set-maximizable":{"identifier":"deny-set-maximizable","description":"Denies the set_maximizable command without any pre-configured scope.","commands":{"allow":[],"deny":["set_maximizable"]}},"deny-set-min-size":{"identifier":"deny-set-min-size","description":"Denies the set_min_size command without any pre-configured scope.","commands":{"allow":[],"deny":["set_min_size"]}},"deny-set-minimizable":{"identifier":"deny-set-minimizable","description":"Denies the set_minimizable command without any pre-configured scope.","commands":{"allow":[],"deny":["set_minimizable"]}},"deny-set-position":{"identifier":"deny-set-position","description":"Denies the set_position command without any pre-configured scope.","commands":{"allow":[],"deny":["set_position"]}},"deny-set-progress-bar":{"identifier":"deny-set-progress-bar","description":"Denies the set_progress_bar command without any pre-configured scope.","commands":{"allow":[],"deny":["set_progress_bar"]}},"deny-set-resizable":{"identifier":"deny-set-resizable","description":"Denies the set_resizable command without any pre-configured scope.","commands":{"allow":[],"deny":["set_resizable"]}},"deny-set-shadow":{"identifier":"deny-set-shadow","description":"Denies the set_shadow command without any pre-configured scope.","commands":{"allow":[],"deny":["set_shadow"]}},"deny-set-size":{"identifier":"deny-set-size","description":"Denies the set_size command without any pre-configured scope.","commands":{"allow":[],"deny":["set_size"]}},"deny-set-skip-taskbar":{"identifier":"deny-set-skip-taskbar","description":"Denies the set_skip_taskbar command without any pre-configured scope.","commands":{"allow":[],"deny":["set_skip_taskbar"]}},"deny-set-title":{"identifier":"deny-set-title","description":"Denies the set_title command without any pre-configured scope.","commands":{"allow":[],"deny":["set_title"]}},"deny-set-title-bar-style":{"identifier":"deny-set-title-bar-style","description":"Denies the set_title_bar_style command without any pre-configured scope.","commands":{"allow":[],"deny":["set_title_bar_style"]}},"deny-set-visible-on-all-workspaces":{"identifier":"deny-set-visible-on-all-workspaces","description":"Denies the set_visible_on_all_workspaces command without any pre-configured scope.","commands":{"allow":[],"deny":["set_visible_on_all_workspaces"]}},"deny-show":{"identifier":"deny-show","description":"Denies the show command without any pre-configured scope.","commands":{"allow":[],"deny":["show"]}},"deny-start-dragging":{"identifier":"deny-start-dragging","description":"Denies the start_dragging command without any pre-configured scope.","commands":{"allow":[],"deny":["start_dragging"]}},"deny-start-resize-dragging":{"identifier":"deny-start-resize-dragging","description":"Denies the start_resize_dragging command without any pre-configured scope.","commands":{"allow":[],"deny":["start_resize_dragging"]}},"deny-theme":{"identifier":"deny-theme","description":"Denies the theme command without any pre-configured scope.","commands":{"allow":[],"deny":["theme"]}},"deny-title":{"identifier":"deny-title","description":"Denies the title command without any pre-configured scope.","commands":{"allow":[],"deny":["title"]}},"deny-toggle-maximize":{"identifier":"deny-toggle-maximize","description":"Denies the toggle_maximize command without any pre-configured scope.","commands":{"allow":[],"deny":["toggle_maximize"]}},"deny-unmaximize":{"identifier":"deny-unmaximize","description":"Denies the unmaximize command without any pre-configured scope.","commands":{"allow":[],"deny":["unmaximize"]}},"deny-unminimize":{"identifier":"deny-unminimize","description":"Denies the unminimize command without any pre-configured scope.","commands":{"allow":[],"deny":["unminimize"]}}},"permission_sets":{},"global_scope_schema":null}}
\ No newline at end of file
diff --git a/src-tauri/gen/schemas/desktop-schema.json b/src-tauri/gen/schemas/desktop-schema.json
index ee10fc6..dbeaad1 100644
--- a/src-tauri/gen/schemas/desktop-schema.json
+++ b/src-tauri/gen/schemas/desktop-schema.json
@@ -1860,6 +1860,13 @@
             "window:allow-set-title"
           ]
         },
+        {
+          "description": "window:allow-set-title-bar-style -> Enables the set_title_bar_style command without any pre-configured scope.",
+          "type": "string",
+          "enum": [
+            "window:allow-set-title-bar-style"
+          ]
+        },
         {
           "description": "window:allow-set-visible-on-all-workspaces -> Enables the set_visible_on_all_workspaces command without any pre-configured scope.",
           "type": "string",
@@ -2301,6 +2308,13 @@
             "window:deny-set-title"
           ]
         },
+        {
+          "description": "window:deny-set-title-bar-style -> Denies the set_title_bar_style command without any pre-configured scope.",
+          "type": "string",
+          "enum": [
+            "window:deny-set-title-bar-style"
+          ]
+        },
         {
           "description": "window:deny-set-visible-on-all-workspaces -> Denies the set_visible_on_all_workspaces command without any pre-configured scope.",
           "type": "string",
diff --git a/src-tauri/gen/schemas/macOS-schema.json b/src-tauri/gen/schemas/macOS-schema.json
index ee10fc6..dbeaad1 100644
--- a/src-tauri/gen/schemas/macOS-schema.json
+++ b/src-tauri/gen/schemas/macOS-schema.json
@@ -1860,6 +1860,13 @@
             "window:allow-set-title"
           ]
         },
+        {
+          "description": "window:allow-set-title-bar-style -> Enables the set_title_bar_style command without any pre-configured scope.",
+          "type": "string",
+          "enum": [
+            "window:allow-set-title-bar-style"
+          ]
+        },
         {
           "description": "window:allow-set-visible-on-all-workspaces -> Enables the set_visible_on_all_workspaces command without any pre-configured scope.",
           "type": "string",
@@ -2301,6 +2308,13 @@
             "window:deny-set-title"
           ]
         },
+        {
+          "description": "window:deny-set-title-bar-style -> Denies the set_title_bar_style command without any pre-configured scope.",
+          "type": "string",
+          "enum": [
+            "window:deny-set-title-bar-style"
+          ]
+        },
         {
           "description": "window:deny-set-visible-on-all-workspaces -> Denies the set_visible_on_all_workspaces command without any pre-configured scope.",
           "type": "string",
diff --git a/src-tauri/src/sequences/dna_utils.rs b/src-tauri/src/sequences/dna_utils.rs
index 2e7ed8d..e0fead3 100644
--- a/src-tauri/src/sequences/dna_utils.rs
+++ b/src-tauri/src/sequences/dna_utils.rs
@@ -1,7 +1,6 @@
 // use std::io::prelude::*;
 use protein_translate::translate;
 
-
 //  DNA Utilities -------------------------------------------------------------------------------------------------------------------
 
 #[tauri::command]
@@ -14,8 +13,5 @@ pub fn translate_dna(dnainput: String) -> String {
 #[cfg(test)]
 mod tests {
     use super::*;
-    use filesize::PathExt;
     use tempfile::NamedTempFile;
-
-
 }
diff --git a/src-tauri/src/sequences/exon_fasta.rs b/src-tauri/src/sequences/exon_fasta.rs
new file mode 100644
index 0000000..953d7e2
--- /dev/null
+++ b/src-tauri/src/sequences/exon_fasta.rs
@@ -0,0 +1,15 @@
+use arrow::util::pretty::pretty_format_batches;
+use datafusion::error::DataFusionError;
+use datafusion::prelude::*;
+use exon::ExonSession;
+
+pub fn get_stats(filename: String) -> Result<String> {
+    let config = SessionConfig::new()
+        .with_target_partitions(4)
+        .with_repartition_file_scans(true);
+
+    let ctx = ExonSession::with_config_exon(config);
+
+    let path = "./exon-examples/data/Ga0604745_crt.gff";
+    let sql = format!("CREATE EXTERNAL TABLE gff STORED AS GFF LOCATION '{path}';",);
+}
diff --git a/src-tauri/src/sequences/fastx.rs b/src-tauri/src/sequences/fastx.rs
index bf99059..f232b32 100644
--- a/src-tauri/src/sequences/fastx.rs
+++ b/src-tauri/src/sequences/fastx.rs
@@ -1,14 +1,11 @@
 // use std::io::prelude::*;
-use std::io::{self, BufReader, BufWriter};
-
-use std::fs::File;
-use std::str;
-
-use serde::{Deserialize, Serialize};
-
 use fasta::record::Definition as FastaDefinition;
 use noodles_fasta as fasta;
 use noodles_fastq as fastq;
+use serde::{Deserialize, Serialize};
+use std::fs::File;
+use std::io::{self, BufReader, BufWriter};
+use std::str;
 
 //  Get Stats -------------------------------------------------------------------------------------------------------------------
 
@@ -171,7 +168,7 @@ pub fn convert_fastq_to_fasta_tauri(input_path: &str, output_path: &str) -> Resu
 #[cfg(test)]
 mod tests {
     use super::*;
-    use filesize::PathExt;
+    use std::fs;
     use tempfile::NamedTempFile;
 
     #[test]
@@ -193,7 +190,8 @@ mod tests {
 
         assert!(result.is_ok());
         assert!(temp_file.path().exists());
-        assert!(temp_file.path().size_on_disk().unwrap() != 0);
+        let metadata = fs::metadata(temp_file.path()).unwrap();
+        assert!(metadata.len() > 0);
     }
 
     #[test]
@@ -204,6 +202,7 @@ mod tests {
 
         assert!(result.is_ok());
         assert!(temp_file.path().exists());
-        assert!(temp_file.path().size_on_disk().unwrap() != 0);
+        let metadata = fs::metadata(temp_file.path()).unwrap();
+        assert!(metadata.len() > 0);
     }
 }
diff --git a/src-tauri/src/sequences/rnapkin.rs b/src-tauri/src/sequences/rnapkin.rs
index fd7d47b..2ed3dee 100644
--- a/src-tauri/src/sequences/rnapkin.rs
+++ b/src-tauri/src/sequences/rnapkin.rs
@@ -1,9 +1,8 @@
-use std::path::PathBuf;
-
 use rnapkin;
 use rnapkin::draw::{self, colors::ColorTheme, Mirror};
 use rnapkin::forest;
 use rnapkin::rnamanip::{self, Nucleotide};
+use std::path::PathBuf;
 
 #[tauri::command(rename_all = "snake_case")]
 pub fn rnapkin_fn(
@@ -24,7 +23,6 @@ pub fn rnapkin_fn(
         _ => ColorTheme::default(),
     };
 
-    
     let mut lines = sequence.split("\n").map(|x| x.to_string());
 
     // https://github.com/ukmrs/rnapkin/blob/main/src/main.rs#L61
@@ -85,15 +83,12 @@ pub fn rnapkin_fn(
 #[cfg(test)]
 mod tests {
     use super::*;
-    use filesize::PathExt;
-    use tempfile::NamedTempFile;
 
     //  Todo:  Test case for malfomred string
     //  Todo:  Allow passing a file instead
 
     #[test]
     fn test_rnapkin() {
-
         let BUBBLE_RADIUS: f64 = 0.5;
 
         let tree1 = ">fantastic guanine riboswitch