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Parsing of annotation #2

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julien-roux opened this issue Aug 31, 2016 · 1 comment
Closed

Parsing of annotation #2

julien-roux opened this issue Aug 31, 2016 · 1 comment

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@julien-roux
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julien-roux commented Aug 31, 2016 •
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It would be nice to have a function allowing to easily parse the Affymetrix and RNA-seq annotations data frames. For example it might be super useful to:

  • query tissues and stages IDs using free-text strings
  • for a given stage or organ ID, retrieve all children stages or organs
  • retrieve samples annotated to a given tissues, including or not its sub-structures
@julien-roux julien-roux mentioned this issue Dec 14, 2016
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Added BgeeDB/BgeeDB_R#7

-> Closing this issue here

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