diff --git a/src/reference/glossary.md b/src/reference/glossary.md index 6e52d18..d79279b 100644 --- a/src/reference/glossary.md +++ b/src/reference/glossary.md @@ -2,31 +2,35 @@ This glossary provides definitions for terms used throughout the project documentation. +:::{glossary} + Aeon -: The source of all being [^1] + The source of all being. [^1] Session -: For experiment 0.1, the event over the time period when an animal is placed in the nesting cage until the time the animal is removed from the nesting cage. + For experiment 0.1, the event over the time period when an animal is placed in the nesting cage until the time the animal is removed from the nesting cage. Trial -: For experiment 0.1, the event over the time period when an animal starts moving the wheel on a patch until the time a pellet is delivered. Every experiment 0.1 session ends on incompleted trials. + For experiment 0.1, the event over the time period when an animal starts moving the wheel on a patch until the time a pellet is delivered. Every experiment 0.1 {term}`session` ends on incompleted trials. Acquisition Epoch -: The event over the time period when the acquistion computer is on and acquiring data until it is stopped. For experiment 0.1 there are multiple acquisition runs due to Bonsai/Windows being restarted. + The event over the time period when the acquistion computer is on and acquiring data until it is stopped. For experiment 0.1 there are multiple acquisition runs due to Bonsai/Windows being restarted. Acquisition Chunk Duration -: The time duration over which datastream files are written out. For experiment 0.1, datastreams were written out in files of 1 hour chunk durations. + The time duration over which datastream files are written out. For experiment 0.1, datastreams were written out in files of 1 hour chunk durations. Acquisition Chunk -: The event (i.e. all data) over a particular acquisition chunk duration. + The event (i.e. all data) over a particular {term}`acquisition chunk duration`. Acquisition Slice Duration -: The minimum time resolution a user can get from an initial query of a Datajoint table (the timebin size of BLOB and QC data stored in Datajoint tables). For experiment 0.1 this was 10 minutes. + The minimum time resolution a user can get from an initial query of a Datajoint table (the timebin size of BLOB and QC data stored in Datajoint tables). For experiment 0.1 this was 10 minutes. Acquisition Slice -: The event (i.e. all data) over a particular acquisition slice duration. + The event (i.e. all data) over a particular {term}`acquisition slice duration`. Task Protocol -: An integer number and associated string describing a unique behavioral task run in Project Aeon. For experiment 0.1, there were 8 unique behavioral tasks run. + An integer number and associated string describing a unique behavioral task run in Project Aeon. For experiment 0.1, there were 8 unique behavioral tasks run. + +::: [^1]: https://en.wikipedia.org/wiki/Aeon_(Gnosticism) \ No newline at end of file