From 0b99594e7106ebfd0df06b7abd5374f768bb5920 Mon Sep 17 00:00:00 2001 From: snizzleorg Date: Thu, 17 Nov 2022 11:41:47 +0100 Subject: [PATCH] moved documentation outside of code folder --- .../{Spectral-FLIM GUI => }/AddScans.fig | Bin .../{Spectral-FLIM GUI => }/AddScans.m | 0 .../{Spectral-FLIM GUI => }/Calc_mIRF.m | 0 .../{Spectral-FLIM GUI => }/Convergence.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Convol.m | 0 .../{Spectral-FLIM GUI => }/DetectTimeGates.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/EFilter.m | 0 .../{Spectral-FLIM GUI => }/FastFLIM.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Fluofit.m | 0 .../{Spectral-FLIM GUI => }/Fret_Series.m | 0 .../{Spectral-FLIM GUI => }/Get_Params.mat | Bin .../{Spectral-FLIM GUI => }/HT3_Read.m | 0 .../{Spectral-FLIM GUI => }/HT3_ScanRead.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/IRF_Fun.m | 0 .../{Spectral-FLIM GUI => }/IRF_Read.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/KLF.m | 0 .../{Spectral-FLIM GUI => }/LMFsolve.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/List.mat | Bin .../{Spectral-FLIM GUI => }/MT_ScanRead.m | 0 .../{Spectral-FLIM GUI => }/MakeComposite.fig | Bin .../{Spectral-FLIM GUI => }/MakeComposite.m | 0 .../{Spectral-FLIM GUI => }/MomentAnalysis.m | 0 .../{Spectral-FLIM GUI => }/PT3_Read.m | 0 .../{Spectral-FLIM GUI => }/PT3_ScanRead.m | 0 .../{Spectral-FLIM GUI => }/PTU_Read.m | 0 .../{Spectral-FLIM GUI => }/PTU_Read_Head.m | 0 .../{Spectral-FLIM GUI => }/PTU_ScanRead.m | 0 .../{Spectral-FLIM GUI => }/Pattern.mat | Bin .../{Spectral-FLIM GUI => }/Pattern_Fit.fig | Bin .../{Spectral-FLIM GUI => }/Pattern_Fit.m | 0 .../{Spectral-FLIM GUI => }/Patternfit.m | 0 .../{Spectral-FLIM GUI => }/Plot_UnmixingResults.m | 0 .../{Spectral-FLIM GUI => }/Process_file.m | 0 .../{Spectral-FLIM GUI => }/Read_PTU_MultiHarp.m | 0 .../{Spectral-FLIM GUI => }/Results_4.fig | Bin .../{Spectral-FLIM GUI => }/Results_4.m | 0 .../{Spectral-FLIM GUI => }/Set_Params.fig | Bin .../{Spectral-FLIM GUI => }/Set_Params.m | 0 .../{Spectral-FLIM GUI => }/Set_PatternOptions.fig | Bin .../{Spectral-FLIM GUI => }/Set_PatternOptions.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Simplex.m | 0 .../{Spectral-FLIM GUI => }/TCSPC_Fun.m | 0 .../{Spectral-FLIM GUI => }/TheProcessor.fig | Bin .../{Spectral-FLIM GUI => }/TheProcessor.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/c_map.mat | Bin .../{Spectral-FLIM GUI => }/colorPalette.m | 0 .../{Spectral-FLIM GUI => }/cscatter.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/data.mat | Bin Spectral-FLIM GUI/{Spectral-FLIM GUI => }/dlsfit.m | 0 .../{Spectral-FLIM GUI => }/eval_results.m | 0 .../{Spectral-FLIM GUI => }/getWorkersAvailable.m | 0 .../{Spectral-FLIM GUI => }/load_data.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/lsfit.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/mHist.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/sFLIM.fig | Bin Spectral-FLIM GUI/{Spectral-FLIM GUI => }/sFLIM.m | 0 Spectral-FLIM GUI/{Spectral-FLIM GUI => }/smooth.m | 0 .../{Spectral-FLIM GUI => }/smooth1D.m | 0 .../{Spectral-FLIM GUI => }/zeiss_ScanRead.m | 0 .../Pattern_Analysis.PNG | Bin .../Spectral-FLIM-FRET.pdf | Bin .../Spectral-FLIM-FRET.pptx | Bin .../Spectral-FLIM_instructions Tifs/Slide1.TIF | Bin .../Spectral-FLIM_instructions Tifs/Slide2.TIF | Bin .../Spectral-FLIM_instructions Tifs/Slide3.TIF | Bin .../Spectral-FLIM_instructions Tifs/Slide4.TIF | Bin .../Unmixing_done_msg.PNG | Bin .../multi-core_unmixing.PNG | Bin .../sFLIM-FLIM-FRET.PNG | Bin 69 files changed, 0 insertions(+), 0 deletions(-) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/AddScans.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/AddScans.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Calc_mIRF.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Convergence.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Convol.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/DetectTimeGates.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/EFilter.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/FastFLIM.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Fluofit.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Fret_Series.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Get_Params.mat (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/HT3_Read.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/HT3_ScanRead.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/IRF_Fun.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/IRF_Read.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/KLF.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/LMFsolve.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/List.mat (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/MT_ScanRead.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/MakeComposite.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/MakeComposite.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/MomentAnalysis.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/PT3_Read.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/PT3_ScanRead.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/PTU_Read.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/PTU_Read_Head.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/PTU_ScanRead.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Pattern.mat (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Pattern_Fit.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Pattern_Fit.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Patternfit.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Plot_UnmixingResults.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Process_file.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Read_PTU_MultiHarp.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Results_4.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Results_4.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Set_Params.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Set_Params.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Set_PatternOptions.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Set_PatternOptions.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/Simplex.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/TCSPC_Fun.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/TheProcessor.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/TheProcessor.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/c_map.mat (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/colorPalette.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/cscatter.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/data.mat (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/dlsfit.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/eval_results.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/getWorkersAvailable.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/load_data.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/lsfit.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/mHist.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/sFLIM.fig (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/sFLIM.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/smooth.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/smooth1D.m (100%) rename Spectral-FLIM GUI/{Spectral-FLIM GUI => }/zeiss_ScanRead.m (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Pattern_Analysis.PNG (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Spectral-FLIM-FRET.pdf (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Spectral-FLIM-FRET.pptx (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Spectral-FLIM_instructions Tifs/Slide1.TIF (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Spectral-FLIM_instructions Tifs/Slide2.TIF (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Spectral-FLIM_instructions Tifs/Slide3.TIF (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Spectral-FLIM_instructions Tifs/Slide4.TIF (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/Unmixing_done_msg.PNG (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/multi-core_unmixing.PNG (100%) rename {Spectral-FLIM GUI/Spectral-FLIM GUI/spectral-FLIM Software Usage Instructions => spectral-FLIM Software Usage Instructions}/sFLIM-FLIM-FRET.PNG (100%) diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/AddScans.fig b/Spectral-FLIM GUI/AddScans.fig similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/AddScans.fig rename to Spectral-FLIM GUI/AddScans.fig diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/AddScans.m b/Spectral-FLIM GUI/AddScans.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/AddScans.m rename to Spectral-FLIM GUI/AddScans.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Calc_mIRF.m b/Spectral-FLIM GUI/Calc_mIRF.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Calc_mIRF.m rename to Spectral-FLIM GUI/Calc_mIRF.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Convergence.m b/Spectral-FLIM GUI/Convergence.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Convergence.m rename to Spectral-FLIM GUI/Convergence.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Convol.m b/Spectral-FLIM GUI/Convol.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Convol.m rename to Spectral-FLIM GUI/Convol.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/DetectTimeGates.m b/Spectral-FLIM GUI/DetectTimeGates.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/DetectTimeGates.m rename to Spectral-FLIM GUI/DetectTimeGates.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/EFilter.m b/Spectral-FLIM GUI/EFilter.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/EFilter.m rename to Spectral-FLIM GUI/EFilter.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/FastFLIM.m b/Spectral-FLIM GUI/FastFLIM.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/FastFLIM.m rename to Spectral-FLIM GUI/FastFLIM.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Fluofit.m b/Spectral-FLIM GUI/Fluofit.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Fluofit.m rename to Spectral-FLIM GUI/Fluofit.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Fret_Series.m b/Spectral-FLIM GUI/Fret_Series.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Fret_Series.m rename to Spectral-FLIM GUI/Fret_Series.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Get_Params.mat b/Spectral-FLIM GUI/Get_Params.mat similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Get_Params.mat rename to Spectral-FLIM GUI/Get_Params.mat diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/HT3_Read.m b/Spectral-FLIM GUI/HT3_Read.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/HT3_Read.m rename to Spectral-FLIM GUI/HT3_Read.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/HT3_ScanRead.m b/Spectral-FLIM GUI/HT3_ScanRead.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/HT3_ScanRead.m rename to Spectral-FLIM GUI/HT3_ScanRead.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/IRF_Fun.m b/Spectral-FLIM GUI/IRF_Fun.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/IRF_Fun.m rename to Spectral-FLIM GUI/IRF_Fun.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/IRF_Read.m b/Spectral-FLIM GUI/IRF_Read.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/IRF_Read.m rename to Spectral-FLIM GUI/IRF_Read.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/KLF.m b/Spectral-FLIM GUI/KLF.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/KLF.m rename to Spectral-FLIM GUI/KLF.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/LMFsolve.m b/Spectral-FLIM GUI/LMFsolve.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/LMFsolve.m rename to 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b/Spectral-FLIM GUI/MomentAnalysis.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/MomentAnalysis.m rename to Spectral-FLIM GUI/MomentAnalysis.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/PT3_Read.m b/Spectral-FLIM GUI/PT3_Read.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/PT3_Read.m rename to Spectral-FLIM GUI/PT3_Read.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/PT3_ScanRead.m b/Spectral-FLIM GUI/PT3_ScanRead.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/PT3_ScanRead.m rename to Spectral-FLIM GUI/PT3_ScanRead.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/PTU_Read.m b/Spectral-FLIM GUI/PTU_Read.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/PTU_Read.m rename to Spectral-FLIM GUI/PTU_Read.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/PTU_Read_Head.m b/Spectral-FLIM GUI/PTU_Read_Head.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM 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b/Spectral-FLIM GUI/Results_4.fig similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Results_4.fig rename to Spectral-FLIM GUI/Results_4.fig diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Results_4.m b/Spectral-FLIM GUI/Results_4.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Results_4.m rename to Spectral-FLIM GUI/Results_4.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Set_Params.fig b/Spectral-FLIM GUI/Set_Params.fig similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Set_Params.fig rename to Spectral-FLIM GUI/Set_Params.fig diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Set_Params.m b/Spectral-FLIM GUI/Set_Params.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/Set_Params.m rename to Spectral-FLIM GUI/Set_Params.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/Set_PatternOptions.fig b/Spectral-FLIM GUI/Set_PatternOptions.fig similarity index 100% rename from Spectral-FLIM 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diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/lsfit.m b/Spectral-FLIM GUI/lsfit.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/lsfit.m rename to Spectral-FLIM GUI/lsfit.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/mHist.m b/Spectral-FLIM GUI/mHist.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/mHist.m rename to Spectral-FLIM GUI/mHist.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/sFLIM.fig b/Spectral-FLIM GUI/sFLIM.fig similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/sFLIM.fig rename to Spectral-FLIM GUI/sFLIM.fig diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/sFLIM.m b/Spectral-FLIM GUI/sFLIM.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/sFLIM.m rename to Spectral-FLIM GUI/sFLIM.m diff --git a/Spectral-FLIM GUI/Spectral-FLIM GUI/smooth.m b/Spectral-FLIM GUI/smooth.m similarity index 100% rename from Spectral-FLIM GUI/Spectral-FLIM GUI/smooth.m rename to Spectral-FLIM 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