import cupy as cp
-from pySDC.core.errors import DataError
try :
from mpi4py import MPI
@@ -78,6 +77,7 @@ Source code for implementations.datatype_classes.cupy_mesh ):
obj = cp . ndarray . __new__ ( cls , init [ 0 ], dtype = init [ 2 ], ** kwargs )
obj . fill ( val )
+
cls . comm = init [ 1 ]
else :
raise NotImplementedError ( type ( init ))
return obj
diff --git a/_modules/implementations/sweeper_classes/Runge_Kutta.html b/_modules/implementations/sweeper_classes/Runge_Kutta.html
index acc2b62565..f47b58234e 100644
--- a/_modules/implementations/sweeper_classes/Runge_Kutta.html
+++ b/_modules/implementations/sweeper_classes/Runge_Kutta.html
@@ -78,17 +78,24 @@
Source code for implementations.sweeper_classes.Runge_Kutta elif
len ( nodes ) != matrix . shape [ 0 ]:
raise ParameterError ( f 'Incompatible number of nodes! Need { matrix . shape [ 0 ] } , got { len ( nodes ) } ' )
-
# Set number of nodes, left and right interval boundaries
-
self . num_solution_stages = 1
-
self . num_nodes = matrix . shape [ 0 ] + self . num_solution_stages
+
self . globally_stiffly_accurate = np . allclose ( matrix [ - 1 ], weights )
+
self . tleft = 0.0
self . tright = 1.0
-
-
self . nodes = np . append ( np . append ([ 0 ], nodes ), [ 1 ])
+
self . num_solution_stages = 0 if self . globally_stiffly_accurate else 1
+
self . num_nodes = matrix . shape [ 0 ] + self . num_solution_stages
self . weights = weights
-
self . Qmat = np . zeros ([ self . num_nodes + 1 , self . num_nodes + 1 ])
-
self . Qmat [ 1 : - 1 , 1 : - 1 ] = matrix
-
self . Qmat [ - 1 , 1 : - 1 ] = weights # this is for computing the solution to the step from the previous stages
+
+
if self . globally_stiffly_accurate :
+
# For globally stiffly accurate methods, the last row of the Butcher tableau is the same as the weights.
+
self . nodes = np . append ([ 0 ], nodes )
+
self . Qmat = np . zeros ([ self . num_nodes + 1 , self . num_nodes + 1 ])
+
self . Qmat [ 1 :, 1 :] = matrix
+
else :
+
self . nodes = np . append ( np . append ([ 0 ], nodes ), [ 1 ])
+
self . Qmat = np . zeros ([ self . num_nodes + 1 , self . num_nodes + 1 ])
+
self . Qmat [ 1 : - 1 , 1 : - 1 ] = matrix
+
self . Qmat [ - 1 , 1 : - 1 ] = weights # this is for computing the solution to the step from the previous stages
self . left_is_node = True
self . right_is_node = self . nodes [ - 1 ] == self . tright
@@ -341,7 +348,7 @@
Source code for implementations.sweeper_classes.Runge_Kutta rhs
+= lvl . dt * self . QI [ m + 1 , j ] * self . get_full_f ( lvl . f [ j ])
# implicit solve with prefactor stemming from the diagonal of Qd, use previous stage as initial guess
-
if self . coll . implicit :
+
if self . QI [ m + 1 , m + 1 ] != 0 :
lvl . u [ m + 1 ][:] = prob . solve_system (
rhs , lvl . dt * self . QI [ m + 1 , m + 1 ], lvl . u [ m ], lvl . time + lvl . dt * self . coll . nodes [ m + 1 ]
)
diff --git a/coverage/class_index.html b/coverage/class_index.html
index 46c40dc514..7b644d92d7 100644
--- a/coverage/class_index.html
+++ b/coverage/class_index.html
@@ -55,7 +55,7 @@
coverage.py v7.6.1 ,
- created at 2024-09-09 14:59 +0000
+ created at 2024-09-13 11:13 +0000
@@ -889,12 +889,12 @@
100%
- pySDC/implementations/datatype_classes/cupy_mesh.py cupy_mesh 26
- 8
+ pySDC/implementations/datatype_classes/cupy_mesh.py cupy_mesh 27
+ 6
1
- 69%
+ 78%
pySDC/implementations/datatype_classes/cupy_mesh.py
pySDC/implementations/datatype_classes/cupy_mesh.py (no class) 23
+ 22
2
0
- 91%
+ 91%
pySDC/implementations/datatype_classes/fenics_mesh.py
pySDC/implementations/sweeper_classes/Runge_Kutta.py ButcherTableau 24
- 1
+ 29
+ 0
8
- 96%
+ 100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ButcherTableauEmbedded pySDC/implementations/sweeper_classes/Runge_Kutta.py ButcherTableauEmbedded 25
1
8
96%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta 60
9
2
85%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX 33
8
0
76%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py Heun_Euler pySDC/implementations/sweeper_classes/Runge_Kutta.py Heun_Euler 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py Cash_Karp pySDC/implementations/sweeper_classes/Runge_Kutta.py Cash_Karp 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py DIRK43 pySDC/implementations/sweeper_classes/Runge_Kutta.py DIRK43 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK53 pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK53 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK43 pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK43 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAERK pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAERK 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK54 pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK54 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAESDIRK2 pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAESDIRK2 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SA pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SA 1
0
0
@@ -5365,10 +5365,10 @@
Total
- 25981
- 5713
+ 25986
+ 5710
4994
- 78%
+ 78%
@@ -5381,7 +5381,7 @@
coverage.py v7.6.1 ,
- created at 2024-09-09 14:59 +0000
+ created at 2024-09-13 11:13 +0000
diff --git a/coverage/coverage-badge.svg b/coverage/coverage-badge.svg
index 3830e2928a..1a2e9f0ce7 100644
--- a/coverage/coverage-badge.svg
+++ b/coverage/coverage-badge.svg
@@ -1 +1 @@
-coverage: 78.01% coverage coverage 78.01% 78.01% coverage: 78.03% coverage coverage 78.03% 78.03%
coverage.py v7.6.1 ,
- created at 2024-09-09 14:59 +0000
+ created at 2024-09-13 11:13 +0000
@@ -2961,12 +2961,12 @@
100%
- pySDC/implementations/datatype_classes/cupy_mesh.py cupy_mesh.__new__ 7
+ pySDC/implementations/datatype_classes/cupy_mesh.py cupy_mesh.__new__ 8
0
1
- 100%
+ 100%
pySDC/implementations/datatype_classes/cupy_mesh.py
pySDC/implementations/datatype_classes/cupy_mesh.py
pySDC/implementations/datatype_classes/cupy_mesh.py (no function) 23
+ 22
2
0
- 91%
+ 91%
pySDC/implementations/datatype_classes/fenics_mesh.py
pySDC/implementations/sweeper_classes/Runge_Kutta.py ButcherTableau.__init__ 24
- 1
+ 29
+ 0
8
- 96%
+ 100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ButcherTableauEmbedded.__init__ pySDC/implementations/sweeper_classes/Runge_Kutta.py ButcherTableauEmbedded.__init__ 25
1
8
96%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.__init__ pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.__init__ 14
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.get_Q_matrix pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.get_Q_matrix 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.get_Butcher_tableau pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.get_Butcher_tableau 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.get_full_f pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.get_full_f 7
1
1
86%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.integrate pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.integrate 8
8
0
0%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.update_nodes pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.update_nodes 16
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.compute_end_point pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.compute_end_point 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.level pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.level 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.level pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.level 5
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.predict pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKutta.predict 6
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.__init__ pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.__init__ 3
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.predict pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.predict 7
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.get_Butcher_tableau_explicit pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.get_Butcher_tableau_explicit 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.integrate pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.integrate 8
8
0
0%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.update_nodes pySDC/implementations/sweeper_classes/Runge_Kutta.py RungeKuttaIMEX.update_nodes 14
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py Heun_Euler.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py Heun_Euler.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py Cash_Karp.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py Cash_Karp.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py DIRK43.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py DIRK43.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK53.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK53.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK43.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py ESDIRK43.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAERK.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAERK.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK54.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK54.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAESDIRK2.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SAESDIRK2.get_update_order 1
0
0
100%
- pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SA.get_update_order pySDC/implementations/sweeper_classes/Runge_Kutta.py ARK548L2SA.get_update_order 1
0
0
@@ -16589,10 +16589,10 @@
Total
- 25981
- 5713
+ 25986
+ 5710
4994
- 78%
+ 78%
@@ -16605,7 +16605,7 @@
coverage.py v7.6.1 ,
- created at 2024-09-09 14:59 +0000
+ created at 2024-09-13 11:13 +0000
diff --git a/coverage/index.html b/coverage/index.html
index 53f0ed5d72..cdc139927e 100644
--- a/coverage/index.html
+++ b/coverage/index.html
@@ -54,7 +54,7 @@
coverage.py v7.6.1 ,
- created at 2024-09-09 14:59 +0000
+ created at 2024-09-13 11:13 +0000
@@ -346,9 +346,9 @@
pySDC/implementations/datatype_classes/cupy_mesh.py 57
- 10
+ 8
3
- 82%
+ 86%
pySDC/implementations/datatype_classes/fenics_mesh.py
pySDC/implementations/sweeper_classes/Runge_Kutta.py 281
- 19
+ 286
+ 18
18
- 93%
+ 94%
pySDC/implementations/sweeper_classes/Runge_Kutta_Nystrom.py
Total
- 25981
- 5713
+ 25986
+ 5710
4997
- 78%
+ 78%
@@ -2414,7 +2414,7 @@
coverage.py v7.6.1 ,
- created at 2024-09-09 14:59 +0000
+ created at 2024-09-13 11:13 +0000
diff --git a/coverage/status.json b/coverage/status.json
index 6a2bb68aea..8ec13aa6e0 100644
--- a/coverage/status.json
+++ b/coverage/status.json
@@ -1 +1 @@
-{"note":"This file is an internal implementation detail to speed up HTML report generation. Its format can change at any time. 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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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@@ -65,7 +65,7 @@
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» next
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» next
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+ created at 2024-09-13 11:13 +0000
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@@ -65,7 +65,7 @@
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coverage.py v7.6.1 ,
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+ created at 2024-09-13 11:13 +0000
» next
coverage.py v7.6.1 ,
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+ created at 2024-09-13 11:13 +0000
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Coverage for pySDC/implementations/datatype_classes/cupy_mesh.py: 82%
+ Coverage for pySDC/implementations/datatype_classes/cupy_mesh.py: 86%
Coverage for pySDC/implementations/datatype_classes/cupy_mesh.py :
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+ 86%
57 statements
- 47