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run-loggers-2019-12-28.yaml
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# Cruise definition file for Alucia
# Hand coded - 2019-12-13
#################################
loggers:
wix:
configs:
- wix->off
- wix->file
cnav:
configs:
- cnav->off
- cnav->file
posmv:
configs:
- posmv->off
- posmv->file
sbe45:
configs:
- sbe45->off
- sbe45->file
sbe48:
configs:
- sbe48->off
- sbe48->file
flow:
configs:
- flow->off
- flow->file
gyro:
configs:
- gyro->off
- gyro->file
cstar:
configs:
- cstar->off
- cstar->file
fluorometer:
configs:
- fluorometer->off
- fluorometer->file
sonardyne: # no data coming through?
configs:
- sonardyne->off
- sonardyne->file
knudsen: # no data coming through?
configs:
- knudsen->off
- knudsen->file
seawater_gravity:
configs:
- seawater_gravity->off
- seawater_gravity->on
true_wind:
configs:
- true_wind->off
- true_wind->on
nmea_writer:
configs:
- nmea_writer->off
- nmea_writer->on
snapshot:
configs:
- snapshot->off
- snapshot->on
#################################
modes:
'off':
wix: wix->off
cnav: cnav->off
posmv: posmv->off
sbe45: sbe45->off
sbe48: sbe48->off
flow: flow->off
gyro: gyro->off
fluorometer: fluorometer->off
cstar: cstar->off
sonardyne: sonardyne->off
knudsen: knudsen->off
seawater_gravity: seawater_gravity->off
true_wind: true_wind->off
nmea_writer: nmea_writer->off
snapshot: snapshot->off
port:
wix: wix->file
cnav: cnav->file
posmv: posmv->file
sbe45: sbe45->off
sbe48: sbe48->file
flow: flow->file
gyro: gyro->file
fluorometer: fluorometer->off
cstar: cstar->off
sonardyne: sonardyne->off
knudsen: knudsen->off
seawater_gravity: seawater_gravity->on
true_wind: true_wind->on
nmea_writer: nmea_writer->on
snapshot: snapshot->on
underway:
wix: wix->file
cnav: cnav->file
posmv: posmv->file
sbe45: sbe45->file
sbe48: sbe48->file
flow: flow->file
gyro: gyro->file
fluorometer: fluorometer->file
cstar: cstar->file
sonardyne: sonardyne->off
knudsen: knudsen->file
seawater_gravity: seawater_gravity->on
true_wind: true_wind->on
nmea_writer: nmea_writer->on
snapshot: snapshot->on
subops:
wix: wix->file
cnav: cnav->file
posmv: posmv->file
sbe45: sbe45->file
sbe48: sbe48->file
flow: flow->file
gyro: gyro->file
fluorometer: fluorometer->file
cstar: cstar->file
sonardyne: sonardyne->file
knudsen: knudsen->file
seawater_gravity: seawater_gravity->on
true_wind: true_wind->on
nmea_writer: nmea_writer->on
snapshot: snapshot->on
default_mode: port
#################################
configs:
#################################
# 'off' configs
#################################
wix->off:
name: wix->off
cnav->off:
name: cnav->off
posmv->off:
name: posmv->off
sbe45->off:
name: sbe45->off
sbe48->off:
name: sbe48->off
flow->off:
name: flow->off
gyro->off:
name: gyro->off
cstar->off:
name: cstar->off
sonardyne->off:
name: sonardyne->off
fluorometer->off:
name: fluorometer->off
knudsen->off:
name: knudsen->off
seawater_gravity->off:
name: seawater_gravity->off
true_wind->off:
name: true_wind->off
nmea_writer->off:
name: nmea_writer->off
snapshot->off:
name: snapshot->off
#################################
# 'file' configs
############# WIX ###############
wix->file:
name: wix->file
readers:
class: SerialReader
kwargs:
port: /dev/ttyr02
baudrate: 19200
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/MET
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: met
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter # write parsed data to logfile
kwargs:
filename: /data/openrvdas/proc/MET_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter # write to database
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
############# End WIX ###############
############# CNAV ###############
cnav->file:
name: cnav->file
readers:
class: UDPReader
kwargs:
port: 56410
eol: "\n"
writers:
- class: UDPWriter
kwargs:
port: 55001 #The everything-goes-to-it port
interface: 172.16.60.20
eol: "\n"
- class: ComposedWriter
kwargs:
transforms:
class: TimestampTransform
writers:
class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/CNAV
- class: ComposedWriter
kwargs:
transforms:
- class: TimestampTransform
- class: PrefixTransform
kwargs:
prefix: cnav
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter # write parsed to logfile
kwargs:
filename: /data/openrvdas/proc/CNAV_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter # write parsed to database
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
############# End CNAV ###############
############# PosMV ###############
posmv->file:
name: posmv->file
readers:
class: SerialReader
kwargs:
port: /dev/ttyr18
baudrate: 19200
writers:
- class: UDPWriter
kwargs:
interface: 172.16.60.20
port: 55104
eol: "\n"
- class: ComposedWriter
kwargs:
transforms:
class: TimestampTransform
writers:
class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/POSMV
- class: ComposedWriter
kwargs:
transforms:
- class: TimestampTransform
- class: PrefixTransform
kwargs:
prefix: posmv
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter # write parsed to logfile
kwargs:
filename: /data/openrvdas/proc/POSMV_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter # write parsed to database
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
############# End PosMV ###############
############# SBE45 ###############
sbe45->file:
name: sbe45->file
readers:
class: SerialReader
kwargs:
port: /dev/ttyr03
baudrate: 9600
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/SBE45
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: sbe45
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/SBE45_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
############# End SBE45 ###############
############# SBE48 ###############
sbe48->file:
name: sbe48->file
readers:
class: PolledSerialReader
kwargs:
start_cmd:
- Stop\r\n
- __PAUSE__ 3
- Interval=0\r\n
- __PAUSE__ 3
- StartNow\r\n
stop_cmd:
- Stop\r\n
port: /dev/ttyr00
baudrate: 9600
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/SBE48
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: sbe48
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/SBE48_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
############# End SBE48 ###############
############# Flowmeter ###############
flow->file:
name: flow->file
readers:
class: SerialReader
kwargs:
port: /dev/ttyr06
baudrate: 9600
eol: \r
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/FLOW
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: flow
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/FLOW_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
######### End Flowmeter ############
############# Gyro ###############
gyro->file:
name: gyro->file
readers:
class: UDPReader
kwargs:
port: 56332
writers:
- class: ComposedWriter
kwargs:
transforms:
- class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/GYRO
- class: UDPWriter
kwargs:
port: 55001 # The everything-goes-to-it port
interface: 172.16.60.20
- class: UDPWriter
kwargs:
port: 55100 # Gyro-only port
interface: 172.16.60.20
- class: ComposedWriter
kwargs:
transforms:
- class: TimestampTransform
- class: PrefixTransform
kwargs:
prefix: gyro
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/GYRO_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
######### End Gyro ############
############# Fluorometer ###############
fluorometer->file:
name: fluorometer->file
readers:
class: SerialReader
kwargs:
port: /dev/ttyr04
baudrate: 9600
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/FLUOROMETER
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: fluorometer
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/FLUOROMETER_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
############# End Fluorometer ############
############# Transmissometer ###############
cstar->file:
name: cstar->file
readers:
class: SerialReader
kwargs:
port: /dev/ttyr05
baudrate: 19200
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/CSTAR
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: cstar
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/CSTAR_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
######### End Transmissometer ############
############# Sonardyne ###############
sonardyne->file:
name: sonardyne->file
readers:
class: SerialReader
kwargs:
port: /dev/ttyr11
baudrate: 9600
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/SONARDYNE
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: sonardyne
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/SONARDYNE_PARSED
split_by_date: True
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
######### End Sonardyne ############
######### Knudsen ############
knudsen->file:
name: knudsen->file
readers:
class: UDPReader
kwargs:
port: 55605
transforms:
class: TimestampTransform
writers:
- class: LogfileWriter
kwargs:
filebase: /data/openrvdas/raw/KNUDSEN
- class: ComposedWriter
kwargs:
transforms:
- class: PrefixTransform
kwargs:
prefix: knudsen
- class: ParseTransform
kwargs:
metadata_interval: 10
definition_path: local/alucia/devices/alucia_devices.yaml
writers:
- class: TextFileWriter
kwargs:
filename: /data/openrvdas/proc/KNUDSEN
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
#- class: DatabaseWriter
# kwargs:
# database: data
# host: localhost
# user: rvdas
# password: rvdas
######### End Knudsen ############
######### Seawater Specific Gravity ############
seawater_gravity->on:
name: seawater_gravity->on
readers:
class: CachedDataReader
kwargs:
data_server: localhost:8766
subscription:
fields:
FlowthroughTemp:
seconds: 0
Salinity:
seconds: 0
transforms:
- class: SeawaterSpecificGravityTransform
module: local.alucia.modules.seawater_specific_gravity_transform
kwargs:
# Inputs
temp_field: FlowthroughTemp
salinity_field: Salinity
# not passing in a pressure, so assume surface, i.e. p=1
# Outputs
specific_gravity_name: SeawaterSpecGravity
metadata_interval: 10 # How often should we emit metadata?
writers:
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
######### End Seawater Specific Gravity ############
######### True Wind ############
true_wind->on:
name: true_wind->on
readers:
class: CachedDataReader
kwargs:
data_server: localhost:8766
subscription:
fields:
CNAVCourseTrue:
seconds: 0
GyroHeadingTrue:
seconds: 0
CNAVSpeedKt:
seconds: 0
AvgWindDir:
seconds: 0
AvgWindSpeed:
seconds: 0
seconds: 0
transforms:
- class: TrueWindsTransform
kwargs:
# Inputs
course_field: CNAVCourseTrue
heading_field: GyroHeadingTrue
speed_field: CNAVSpeedKt
wind_dir_field: AvgWindDir
wind_speed_field: AvgWindSpeed
# Outputs
true_dir_name: TrueWindDir
true_speed_name: TrueWindSpeed
apparent_dir_name: ApparentWindDir
# Conversion factors
convert_wind_factor: 1.94384
# List of fields for when we should emit an output
update_on_fields:
- AvgWindDir
metadata_interval: 10 # How often should we emit metadata?
writers:
- class: CachedDataWriter
kwargs:
data_server: localhost:8766
######### End True Wind ############
######### NMEA Writer - $ALMWD, $ALXDR ############
nmea_writer->on:
name: nmea_writer->on
readers:
- class: CachedDataReader
kwargs:
data_server: localhost:8766
subscription:
fields:
TrueWindDir:
seconds: 0
TrueWindSpeed:
seconds: 0
Pressure:
seconds: 0
AirTemp:
seconds: 0
SBE48Temp:
seconds: 0
transforms:
- class: NMEATransform
kwargs:
true_wind_dir_field: TrueWindDir
true_wind_speed_kt_field: TrueWindSpeed
mwd_talker_id: ALMWD
barometer_field: Pressure
barometer_output_field: Barometer
air_temp_field: AirTemp
air_temp_output_field: TempAir
sea_temp_field: SBE48Temp
sea_temp_output_field: ENV_WATER_T
xdr_talker_id: ALXDR
writers:
- class: UDPWriter
kwargs:
port: 55001 # The everything-goes-to-it port
interface: 172.16.60.20
- class: UDPWriter
kwargs:
port: 55400 # MET data port
interface: 172.16.60.20
######### End NMEA Writer - $ALMWD, $ALXDR ############
######### Snapshot of all (relevant) vars ############
snapshot->on:
name: snapshot->on
readers:
- class: CachedDataReader
kwargs:
data_server: localhost:8766
subscription:
fields:
AirTemp:
seconds: 0
AvgWindDir:
seconds: 0
AvgWindSpeed:
seconds: 0
CNAVCourseMag:
seconds: 0
CNAVCourseTrue:
seconds: 0
CNAVEorW:
seconds: 0
CNAVFixQuality:
seconds: 0
CNAVGPSDay:
seconds: 0
CNAVGPSMonth:
seconds: 0
CNAVGPSTime:
seconds: 0
CNAVGPSYear:
seconds: 0
CNAVGyroCal:
seconds: 0
CNAVGyroOffset:
seconds: 0
CNAVHeadingQual:
seconds: 0
CNAVHeadingTrue:
seconds: 0
CNAVHeave:
seconds: 0
CNAVHeightQual:
seconds: 0
CNAVHorizQual:
seconds: 0
CNAVLatitude:
seconds: 0
CNAVLocalHours:
seconds: 0
CNAVLocalZone:
seconds: 0
CNAVLongitude:
seconds: 0
CNAVMode:
seconds: 0
CNAVNorS:
seconds: 0
CNAVNumSats:
seconds: 0
CNAVPitch:
seconds: 0
CNAVRoll:
seconds: 0
CNAVRollPitchQual:
seconds: 0
CNAVSpeedKm:
seconds: 0
CNAVSpeedKt:
seconds: 0
Conductivity:
seconds: 0
CorrectedRawCounts:
seconds: 0
FlowthroughTemp:
seconds: 0
FluorometerSignalCounts:
seconds: 0
GyroHeadingTrue:
seconds: 0
GyroRateOfTurn:
seconds: 0
KnudDepthHF:
seconds: 0
KnudDepthLF:
seconds: 0
KnudLatitude:
seconds: 0
KnudLongitude:
seconds: 0
KnudSoundSpeed:
seconds: 0
KnudValidHF:
seconds: 0
KnudValidLF:
seconds: 0
MaxWindSpeed:
seconds: 0
POSMVCourseMag:
seconds: 0
POSMVCourseTrue:
seconds: 0
POSMVEorW:
seconds: 0
POSMVFixQuality:
seconds: 0
POSMVGPSDay:
seconds: 0
POSMVGPSMonth:
seconds: 0
POSMVGPSTime:
seconds: 0
POSMVGPSYear:
seconds: 0
POSMVGPSYear2:
seconds: 0
POSMVHeadingQual:
seconds: 0
POSMVHeadingTrue:
seconds: 0
POSMVHeave:
seconds: 0
POSMVHeightQual:
seconds: 0
POSMVHorizQual:
seconds: 0
POSMVLastDGPSUpdate:
seconds: 0
POSMVLatitude:
seconds: 0
POSMVLocalHours:
seconds: 0
POSMVLocalZone:
seconds: 0
POSMVLongitude:
seconds: 0
POSMVNorS:
seconds: 0
POSMVNumSats:
seconds: 0
POSMVPitch:
seconds: 0
POSMVRoll:
seconds: 0
POSMVRollPitchQual:
seconds: 0
POSMVSpeedKm:
seconds: 0
POSMVSpeedKt:
seconds: 0
Pressure:
seconds: 0
RH:
seconds: 0
RainAccumulation:
seconds: 0
RainIntensity:
seconds: 0
ReferenceCounts:
seconds: 0
SBE48Date:
seconds: 0
SBE48Temp:
seconds: 0
SBE48Time:
seconds: 0
Salinity:
seconds: 0
SignalCounts:
seconds: 0
SoundVelocity:
seconds: 0
ThermisterCounts:
seconds: 0
UnderwayFlowRate:
seconds: 0
UnderwayFlowVolume:
seconds: 0
transforms:
- class: InterpolationTransform
module: logger.transforms.interpolation_transform
kwargs:
interval: 60
metadata_interval: 360
window: 60
field_spec:
AvgAirTemp:
algorithm:
type: boxcar_average
window: 60
source: AirTemp
AvgAvgWindDir:
algorithm:
type: boxcar_average
window: 60
source: AvgWindDir
AvgAvgWindSpeed:
algorithm:
type: boxcar_average
window: 60
source: AvgWindSpeed
AvgCNAVCourseMag:
algorithm:
type: boxcar_average
window: 60
source: CNAVCourseMag
AvgCNAVCourseTrue:
algorithm:
type: boxcar_average
window: 60
source: CNAVCourseTrue
AvgCNAVEorW:
algorithm:
type: nearest