From ac8f85f56c27c1fddea4561a104a1d594754f5a4 Mon Sep 17 00:00:00 2001 From: StroemPhi Date: Thu, 22 Jun 2023 14:03:18 +0200 Subject: [PATCH] change label to just absorbance, as the definition makes clear this is not a quality but a measurement --- src/ontology/components/vibso_classes.owl | 5 ++--- src/templates/vibso_classes.tsv | 4 ++-- 2 files changed, 4 insertions(+), 5 deletions(-) diff --git a/src/ontology/components/vibso_classes.owl b/src/ontology/components/vibso_classes.owl index 5c4dac5..82528a3 100644 --- a/src/ontology/components/vibso_classes.owl +++ b/src/ontology/components/vibso_classes.owl @@ -403,14 +403,13 @@ AnnotationAssertion(rdfs:label obo:VIBSO_0000027 "number of measurements Z"@en) AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000027 ) SubClassOf(obo:VIBSO_0000027 obo:IAO_0000140) -# Class: obo:VIBSO_0000028 (absorbance measurement datum) +# Class: obo:VIBSO_0000028 (absorbance) AnnotationAssertion(Annotation(dc:source ) Annotation(dc:source ) obo:IAO_0000115 obo:VIBSO_0000028 "A meassurement datum that represents the logarithm to the base 10 (linear absorbance) of the incident (prior to absorption) spectral radiant power, divided by the transmitted spectral radiant power."@en) -AnnotationAssertion(obo:IAO_0000118 obo:VIBSO_0000028 "absorbance"@en) AnnotationAssertion(obo:IAO_0000118 obo:VIBSO_0000028 "extinction"@en) AnnotationAssertion(dc:contributor obo:VIBSO_0000028 ) AnnotationAssertion(rdfs:comment obo:VIBSO_0000028 "Definition was adapted from “afo:absorbance“. We did not reuse/import this AFO term directly due to the associated ontological commitment of AFO. Yet, we will provide a mapping."@en) -AnnotationAssertion(rdfs:label obo:VIBSO_0000028 "absorbance measurement datum"@en) +AnnotationAssertion(rdfs:label obo:VIBSO_0000028 "absorbance"@en) AnnotationAssertion(rdfs:seeAlso obo:VIBSO_0000028 ) SubClassOf(obo:VIBSO_0000028 obo:IAO_0000109) diff --git a/src/templates/vibso_classes.tsv b/src/templates/vibso_classes.tsv index bbd26a2..217ca99 100644 --- a/src/templates/vibso_classes.tsv +++ b/src/templates/vibso_classes.tsv @@ -31,5 +31,5 @@ obo:VIBSO_0000024 point distance Z sampling pace in the Z direction|sampling ste obo:VIBSO_0000025 number of measurements X number of points in the X direction|number of points per line https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 A setting datum that specifies how many equally configured measurements of a sample are to be performed along the X-axis of a certain region of interest. Together with the point distance X, this setting defines the region of interest width. owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 50 number of measurements X = (region of interest width) / (point distance X) obo:VIBSO_0000026 number of measurements Y number of points in the Y direction|number of lines per layer https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 A setting datum that specifies how many equally configured measurements of a sample are to be performed along the Y-axis of a certain region of interest. Together with the point distance Y, this setting defines the region of interest breadth. owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3955 100 number of measurements = (region of interest breadth) / (point distance Y) obo:VIBSO_0000027 number of measurements Z number of points in the Z direction|number of layers per acquisition https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/32 "A setting datum that specifies how many equally configured measurements of a sample are to be performed in the vertical direction (on the Z-axis) of a certain region of interest. -Together with the focal point distance, this setting defines the region of interest depth." owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3956 10 number of measurements Z = (region of interest depth) / (point distance Z) -obo:VIBSO_0000028 absorbance measurement datum extinction|absorbance https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/86 A meassurement datum that represents the logarithm to the base 10 (linear absorbance) of the incident (prior to absorption) spectral radiant power, divided by the transmitted spectral radiant power. https://doi.org/10.1351/goldbook|http://purl.allotrope.org/ontologies/result#AFR_0001157 owl:Class measurement datum ORCID:0000-0002-1595-3213 Definition was adapted from “afo:absorbance“. We did not reuse/import this AFO term directly due to the associated ontological commitment of AFO. Yet, we will provide a mapping. +Together with the focal point distance, this setting defines the region of interest depth." owl:Class setting datum ORCID:0000-0001-7694-5519|ORCID:0000-0002-2239-3956 10 number of measurements Z = (region of interest depth) / (point distance Z) +obo:VIBSO_0000028 absorbance extinction https://github.com/NFDI4Chem/VibrationalSpectroscopyOntology/issues/86 A meassurement datum that represents the logarithm to the base 10 (linear absorbance) of the incident (prior to absorption) spectral radiant power, divided by the transmitted spectral radiant power. https://doi.org/10.1351/goldbook|http://purl.allotrope.org/ontologies/result#AFR_0001157 owl:Class measurement datum ORCID:0000-0002-1595-3213 Definition was adapted from “afo:absorbance“. We did not reuse/import this AFO term directly due to the associated ontological commitment of AFO. Yet, we will provide a mapping.